Skip to content
uauy edited this page Oct 16, 2015 · 11 revisions

Welcome to the expvip-web wiki! This wiki contains tutorials on how to setup the database and run it locally.

  1. Loading Virtual Machine. Instructions on how to setup Virtual Box to run expVIP
  2. Loading Metadata. Detailed scripts in the virtual machine to prepare expVIP for your samples.
  3. Loading data. Description on how to prepare and load the data to expVIP.
  4. Running Kallisto. Instructions on how to run Kallisto and load the results in the database in a single step
  5. Exporting Data. How to extract data from expVIP database.
  6. Graphical Interface Tutorial. How to get the most of the graphical interface, exemplified with the Wheat Genome Browser.
Clone this wiki locally