SpaProx

完成模型训练和预测可以参考tutorial.ipynb

需要在根目录创建logs文件夹，用于记录训练过程。

需要在根目录创建data文件夹存放空间转录组数据，我的data文件夹已上传至google drive

其中包含的数据集如下所示

本项目使用 python 和R两种语言，python所需的依赖库见requirements.txt

R所需的包见spagene.R

Name		Name	Last commit message	Last commit date
Latest commit History 37 Commits
__pycache__		__pycache__
datasets		datasets
human_DLPFC		human_DLPFC
human_lymph_node		human_lymph_node
model		model
mouse_brain_cell2location		mouse_brain_cell2location
mouse_brain_sagittal_anterior		mouse_brain_sagittal_anterior
.gitignore		.gitignore
README.md		README.md
evaluation.py		evaluation.py
feature_selection.py		feature_selection.py
gpu_mem_track.py		gpu_mem_track.py
imb.py		imb.py
imb_torch2.py		imb_torch2.py
loss.py		loss.py
new.ipynb		new.ipynb
requirements.txt		requirements.txt
scprocess.py		scprocess.py
spagene.R		spagene.R
tutorial.ipynb		tutorial.ipynb
utils.py		utils.py

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