Fix atlas handling and transform file issues in `bundle_seg`#80

Open

gagnonanthony wants to merge 12 commits intoscilus:mainfrom gagnonanthony:fix/atlasbundleseg

+202-160

Commits on Dec 12, 2024

fix external atlas use in bundle_seg
gagnonanthony
committed

Commits on Dec 13, 2024

fetch only affine mat for recognize bundle and validate file exist before downloading atlas
gagnonanthony
committed

Commits on Dec 16, 2024

split transform files into 2 differents named outputs for easier handling in workflows
gagnonanthony
committed

Commits on Dec 17, 2024

update version in synthreg + revert memory limit
gagnonanthony
committed

Commits on Dec 18, 2024