Fix atlas handling and transform file issues in bundle_seg
#266
AlexVCaronupdate_pr.yml
on: pull_request
checks
/
compute - changes
16s
checks
/
pre-commit
16s
Matrix: checks / test
Matrix: checks / lint - modules
Matrix: checks / lint - subworkflows
checks
/
status
0s
Annotations
36 errors and 20 warnings
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checks / test (modules/nf-neuro/registration/ants) / test - modules/nf-neuro/registration/ants
The version '3.11' with architecture 'x64' was not found for this operating system.
The list of all available versions can be found here: https://raw.githubusercontent.com/actions/python-versions/main/versions-manifest.json
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checks / test (modules/nf-neuro/registration/ants) / test - modules/nf-neuro/registration/ants
The version '3.11' with architecture 'x64' was not found for this operating system.
The list of all available versions can be found here: https://raw.githubusercontent.com/actions/python-versions/main/versions-manifest.json
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checks / test (modules/nf-neuro/registration/ants) / test - modules/nf-neuro/registration/ants
Process returned exit code 1
Launched as "/__e/node20_alpine/bin/node /__w/_actions/Wandalen/wretry.action/v3.7.2_js_action/src/Runner.mjs /__w/_actions/Wandalen/setup-python/dist/setup/index.js"
Launched at "/__w/nf-neuro/nf-neuro"
Attempts exhausted, made 2 attempts :
Attempt #1 started at : 01:36:40 GMT+0000 (Coordinated Universal Time)
Attempt #2 started at : 01:36:46 GMT+0000 (Coordinated Universal Time)
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checks / test (modules/nf-neuro/registration/ants) / test - modules/nf-neuro/registration/ants
Process completed with exit code 1.
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checks / test (modules/nf-neuro/registration/ants) / test - modules/nf-neuro/registration/ants
Process completed with exit code 127.
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checks / test (modules/nf-neuro/registration/ants) / test - modules/nf-neuro/registration/ants
Process completed with exit code 127.
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checks / test (modules/nf-neuro/registration/ants) / test - modules/nf-neuro/registration/ants
Process completed with exit code 1.
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checks / test (modules/nf-neuro/registration/synthregistration) / test - modules/nf-neuro/registration/synthregistration
The version '3.11' with architecture 'x64' was not found for this operating system.
The list of all available versions can be found here: https://raw.githubusercontent.com/actions/python-versions/main/versions-manifest.json
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checks / test (modules/nf-neuro/registration/synthregistration) / test - modules/nf-neuro/registration/synthregistration
The version '3.11' with architecture 'x64' was not found for this operating system.
The list of all available versions can be found here: https://raw.githubusercontent.com/actions/python-versions/main/versions-manifest.json
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checks / test (modules/nf-neuro/registration/synthregistration) / test - modules/nf-neuro/registration/synthregistration
Process returned exit code 1
Launched as "/__e/node20_alpine/bin/node /__w/_actions/Wandalen/wretry.action/v3.7.2_js_action/src/Runner.mjs /__w/_actions/Wandalen/setup-python/dist/setup/index.js"
Launched at "/__w/nf-neuro/nf-neuro"
Attempts exhausted, made 2 attempts :
Attempt #1 started at : 01:36:41 GMT+0000 (Coordinated Universal Time)
Attempt #2 started at : 01:36:47 GMT+0000 (Coordinated Universal Time)
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checks / test (modules/nf-neuro/registration/synthregistration) / test - modules/nf-neuro/registration/synthregistration
Process completed with exit code 1.
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checks / test (modules/nf-neuro/registration/synthregistration) / test - modules/nf-neuro/registration/synthregistration
Process completed with exit code 127.
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checks / test (modules/nf-neuro/registration/synthregistration) / test - modules/nf-neuro/registration/synthregistration
Process completed with exit code 127.
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checks / test (modules/nf-neuro/registration/synthregistration) / test - modules/nf-neuro/registration/synthregistration
Process completed with exit code 1.
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checks / test (subworkflows/nf-neuro/bundle_seg) / test - subworkflows/nf-neuro/bundle_seg
The version '3.11' with architecture 'x64' was not found for this operating system.
The list of all available versions can be found here: https://raw.githubusercontent.com/actions/python-versions/main/versions-manifest.json
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checks / test (subworkflows/nf-neuro/bundle_seg) / test - subworkflows/nf-neuro/bundle_seg
The version '3.11' with architecture 'x64' was not found for this operating system.
The list of all available versions can be found here: https://raw.githubusercontent.com/actions/python-versions/main/versions-manifest.json
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checks / test (subworkflows/nf-neuro/bundle_seg) / test - subworkflows/nf-neuro/bundle_seg
Process returned exit code 1
Launched as "/__e/node20_alpine/bin/node /__w/_actions/Wandalen/wretry.action/v3.7.2_js_action/src/Runner.mjs /__w/_actions/Wandalen/setup-python/dist/setup/index.js"
Launched at "/__w/nf-neuro/nf-neuro"
Attempts exhausted, made 2 attempts :
Attempt #1 started at : 01:36:53 GMT+0000 (Coordinated Universal Time)
Attempt #2 started at : 01:36:59 GMT+0000 (Coordinated Universal Time)
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checks / test (subworkflows/nf-neuro/bundle_seg) / test - subworkflows/nf-neuro/bundle_seg
Process completed with exit code 127.
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checks / test (subworkflows/nf-neuro/bundle_seg) / test - subworkflows/nf-neuro/bundle_seg
Process completed with exit code 127.
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checks / test (modules/nf-neuro/registration/anattodwi) / test - modules/nf-neuro/registration/anattodwi
The version '3.11' with architecture 'x64' was not found for this operating system.
The list of all available versions can be found here: https://raw.githubusercontent.com/actions/python-versions/main/versions-manifest.json
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checks / test (subworkflows/nf-neuro/bundle_seg) / test - subworkflows/nf-neuro/bundle_seg
Process completed with exit code 1.
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checks / test (modules/nf-neuro/registration/anattodwi) / test - modules/nf-neuro/registration/anattodwi
The version '3.11' with architecture 'x64' was not found for this operating system.
The list of all available versions can be found here: https://raw.githubusercontent.com/actions/python-versions/main/versions-manifest.json
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checks / test (subworkflows/nf-neuro/bundle_seg) / test - subworkflows/nf-neuro/bundle_seg
Process completed with exit code 1.
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checks / test (modules/nf-neuro/registration/anattodwi) / test - modules/nf-neuro/registration/anattodwi
Process returned exit code 1
Launched as "/__e/node20_alpine/bin/node /__w/_actions/Wandalen/wretry.action/v3.7.2_js_action/src/Runner.mjs /__w/_actions/Wandalen/setup-python/dist/setup/index.js"
Launched at "/__w/nf-neuro/nf-neuro"
Attempts exhausted, made 2 attempts :
Attempt #1 started at : 01:36:53 GMT+0000 (Coordinated Universal Time)
Attempt #2 started at : 01:36:59 GMT+0000 (Coordinated Universal Time)
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checks / test (modules/nf-neuro/registration/anattodwi) / test - modules/nf-neuro/registration/anattodwi
Process completed with exit code 127.
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checks / test (modules/nf-neuro/registration/anattodwi) / test - modules/nf-neuro/registration/anattodwi
Process completed with exit code 1.
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checks / test (modules/nf-neuro/registration/anattodwi) / test - modules/nf-neuro/registration/anattodwi
Process completed with exit code 1.
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checks / test (modules/nf-neuro/registration/anattodwi) / test - modules/nf-neuro/registration/anattodwi
Process completed with exit code 127.
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checks / test (subworkflows/nf-neuro/registration) / test - subworkflows/nf-neuro/registration
The version '3.11' with architecture 'x64' was not found for this operating system.
The list of all available versions can be found here: https://raw.githubusercontent.com/actions/python-versions/main/versions-manifest.json
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checks / test (subworkflows/nf-neuro/registration) / test - subworkflows/nf-neuro/registration
The version '3.11' with architecture 'x64' was not found for this operating system.
The list of all available versions can be found here: https://raw.githubusercontent.com/actions/python-versions/main/versions-manifest.json
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checks / test (subworkflows/nf-neuro/registration) / test - subworkflows/nf-neuro/registration
Process returned exit code 1
Launched as "/__e/node20_alpine/bin/node /__w/_actions/Wandalen/wretry.action/v3.7.2_js_action/src/Runner.mjs /__w/_actions/Wandalen/setup-python/dist/setup/index.js"
Launched at "/__w/nf-neuro/nf-neuro"
Attempts exhausted, made 2 attempts :
Attempt #1 started at : 01:37:42 GMT+0000 (Coordinated Universal Time)
Attempt #2 started at : 01:37:48 GMT+0000 (Coordinated Universal Time)
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checks / test (subworkflows/nf-neuro/registration) / test - subworkflows/nf-neuro/registration
Process completed with exit code 127.
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checks / test (subworkflows/nf-neuro/registration) / test - subworkflows/nf-neuro/registration
Process completed with exit code 1.
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checks / test (subworkflows/nf-neuro/registration) / test - subworkflows/nf-neuro/registration
Process completed with exit code 1.
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checks / test (subworkflows/nf-neuro/registration) / test - subworkflows/nf-neuro/registration
Process completed with exit code 127.
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checks / status
Process completed with exit code 1.
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checks / editorconfig
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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checks / compute - changes
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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checks / pre-commit
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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checks / prettier
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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checks / lint - subworkflows (registration) / lint - registration
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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checks / lint - modules (registration/ants) / lint - registration/ants
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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checks / test (modules/nf-neuro/registration/ants) / test - modules/nf-neuro/registration/ants
No files were found with the provided path: tests_workdir/. No artifacts will be uploaded.
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checks / test (modules/nf-neuro/registration/ants) / test - modules/nf-neuro/registration/ants
No files were found with the provided path: tests_reports/. No artifacts will be uploaded.
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checks / lint - modules (registration/anattodwi) / lint - registration/anattodwi
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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checks / test (modules/nf-neuro/registration/synthregistration) / test - modules/nf-neuro/registration/synthregistration
No files were found with the provided path: tests_reports/. No artifacts will be uploaded.
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checks / test (modules/nf-neuro/registration/synthregistration) / test - modules/nf-neuro/registration/synthregistration
No files were found with the provided path: tests_workdir/. No artifacts will be uploaded.
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checks / lint - subworkflows (bundle_seg) / lint - bundle_seg
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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checks / lint - modules (registration/synthregistration) / lint - registration/synthregistration
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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checks / test (subworkflows/nf-neuro/bundle_seg) / test - subworkflows/nf-neuro/bundle_seg
No files were found with the provided path: tests_reports/. No artifacts will be uploaded.
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checks / test (modules/nf-neuro/registration/anattodwi) / test - modules/nf-neuro/registration/anattodwi
No files were found with the provided path: tests_reports/. No artifacts will be uploaded.
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checks / test (subworkflows/nf-neuro/bundle_seg) / test - subworkflows/nf-neuro/bundle_seg
No files were found with the provided path: tests_workdir/. No artifacts will be uploaded.
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checks / test (modules/nf-neuro/registration/anattodwi) / test - modules/nf-neuro/registration/anattodwi
No files were found with the provided path: tests_workdir/. No artifacts will be uploaded.
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checks / test (subworkflows/nf-neuro/registration) / test - subworkflows/nf-neuro/registration
No files were found with the provided path: tests_reports/. No artifacts will be uploaded.
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checks / test (subworkflows/nf-neuro/registration) / test - subworkflows/nf-neuro/registration
No files were found with the provided path: tests_workdir/. No artifacts will be uploaded.
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checks / status
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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