Merge pull request #1045 from erikbgithub/master

baseimage for containers
pysam-developers · Nov 16, 2021 · 1bdbcd4 · 1bdbcd4
2 parents cb05dd4 + 4b7b44c
commit 1bdbcd4
Showing 1 changed file with 13 additions and 0 deletions.
diff --git a/Containerfile b/Containerfile
@@ -0,0 +1,13 @@
+FROM ubi8:latest
+
+RUN yum update \
+  && yum install -y python3-pip python3-devel pigz \
+  && cd /usr/local/bin \
+  && ln -s /usr/bin/python3 python \
+  && pip3 --no-cache-dir install --upgrade pip \
+  && yum clean all \
+  && echo "system packages installed"
+
+RUN python -m pip install pysam
+
+WORKDIR /opt/