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    • eicu-code

      Public
      Code and website related to the eICU Collaborative Research Database
      Jupyter Notebook
      MIT License
      217323978Updated Dec 19, 2024Dec 19, 2024
    • The new PhysioNet platform.
      JavaScript
      BSD 3-Clause "New" or "Revised" License
      205640530Updated Dec 13, 2024Dec 13, 2024
    • Native Python WFDB package
      Jupyter Notebook
      MIT License
      3037537511Updated Nov 27, 2024Nov 27, 2024
    • The PhysioNet Data Use Agreement and License
      MIT License
      126101Updated Oct 29, 2024Oct 29, 2024
    • MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitted to critical care units at a large tertiary care hospital. This repository contains the ETL to the OMOP CDM.
      Python
      Apache License 2.0
      25101Updated Oct 29, 2024Oct 29, 2024
    • Script for generating the PhysioNet pages in the AWS Open Data Registry
      Python
      MIT License
      0101Updated Oct 8, 2024Oct 8, 2024
    • Resources for the Society of Critical Care Medicine (SCCM) Datathon
      Jupyter Notebook
      MIT License
      92102Updated Sep 24, 2024Sep 24, 2024
    • plibflac

      Public
      Read and write FLAC audio files in Python
      C
      GNU General Public License v3.0
      0000Updated Sep 23, 2024Sep 23, 2024
    • MIMIC Code Repository: Code shared by the research community for the MIMIC family of databases
      Jupyter Notebook
      MIT License
      1.5k2.7k23814Updated Aug 26, 2024Aug 26, 2024
    • Course materials for BST209
      HTML
      MIT License
      1300Updated Aug 13, 2024Aug 13, 2024
    • Website for the MIMIC Critical Care Database (currently version MIMIC-III)
      CSS
      MIT License
      113105414Updated Jun 26, 2024Jun 26, 2024
    • Sample code for Hack Aotearoa 2023
      Jupyter Notebook
      MIT License
      6902Updated Jun 17, 2024Jun 17, 2024
    • Materials for the BIDMC datathon (Sat 29 Feb 2020)
      Jupyter Notebook
      MIT License
      31102Updated Jun 17, 2024Jun 17, 2024
    • Pip installable package containing helper functions for datathons
      Python
      MIT License
      1502Updated Jun 17, 2024Jun 17, 2024
    • 0000Updated Apr 25, 2024Apr 25, 2024
    • Mapping the MIMIC-III database to the OMOP schema
      PLpgSQL
      MIT License
      47129406Updated Mar 17, 2024Mar 17, 2024
    • Resources for the GOSSIS datathon in Pittsburgh
      Jupyter Notebook
      MIT License
      0100Updated Feb 27, 2024Feb 27, 2024
    • Tools for tracking citations to MIMIC, PhysioNet etc.
      Jupyter Notebook
      MIT License
      2410Updated Dec 10, 2023Dec 10, 2023
    • cwmed

      Public
      A Python package that facilities the conversion of clinical terminology between two different coding systems for interoperability.
      Python
      MIT License
      0100Updated Oct 18, 2023Oct 18, 2023
    • Platform for annotating physiological waveform data.
      Python
      41222Updated Oct 10, 2023Oct 10, 2023
    • Structured data from echocardiogram reports
      MIT License
      0000Updated Sep 4, 2023Sep 4, 2023
    • Scrub/blur faces in a dataset of images.
      Python
      MIT License
      0000Updated Jul 21, 2023Jul 21, 2023
    • physionet

      Public
      A collection of tools for working with the PhysioNet repository.
      Python
      MIT License
      1769970Updated Jun 11, 2023Jun 11, 2023
    • Website for the LCP Laboratory https://lcp.mit.edu
      HTML
      0122Updated May 1, 2023May 1, 2023
    • Jupyter Notebook
      0100Updated Apr 24, 2023Apr 24, 2023
    • Study in eICU-CRD about vancomycin and associated nephrotoxicity
      Jupyter Notebook
      4520Updated Mar 3, 2023Mar 3, 2023
    • Website for critical-data
      CSS
      MIT License
      6831Updated Jan 26, 2023Jan 26, 2023
    • metaann

      Public
      Collaborative labelling of events in physiological waveforms
      C
      GNU General Public License v2.0
      0000Updated Sep 29, 2022Sep 29, 2022
    • Migrate data from an Oracle database to a Postgres database
      Python
      MIT License
      213030Updated Jun 23, 2022Jun 23, 2022
    • gossis

      Public
      Extracting consistent concepts from multiple databases
      Jupyter Notebook
      612160Updated Apr 13, 2022Apr 13, 2022