v0.3.0

• Extension to 3D
• Inputs can have multiple channels (independent denoising, but only one channel segmentation)
• Generate patches from list of images with different sizes

v0.2.2

Limit n2v to be < 0.3.0 due to n2v v0.3.0 supporting TF2 only.

v0.2.1

• Improved Notebooks
• BioImage ModelZoo Export

DenoiSeg: First Public Release

First public release of the DenoiSeg code.

• Code used during paper writing can be found in scripts/reproduciblity
• Add example notebooks examples/DenoiSeg_2D

Manuscript Figures/Tables

This release contains all jupyter notebooks which were used to create the figures and tables for the manuscript.

Add seg-denoise ratio monitor and DSB n20 evaluation notebook

v0.1.11

Add seg-denoise-ratio monitor (#17)

Add alpha scheduling and data preparation notebooks

Alpha scheduling (#16)

* Add alpha scheduling

Monitor either seg loss, denoise loss or combined loss to reduce lr on plateau dict

v0.1.9

Monitor either seg loss, denoise loss or combined loss to reduce lr o…

Notebooks for baselines and schedule analysis

Notebook (#10)

* Notebooks for DSB2018 n10 grid search over alpha 
* Notebooks for DSB2018 n0, n10, 20, n40 baselines

Loss:weight*denoise+(1-weight)*segmentation

Merge pull request #9 from juglab/alpha_weighted_loss

Change loss to: (1 - weight) * seg + weight * denoise