Notebook (#10)

* Notebooks for DSB2018 n10 grid search over alpha * Notebooks for DSB2018 n0, n10, 20, n40 baselines
juglab · Feb 10, 2020 · 5fcf03e · 5fcf03e
1 parent 9880efc
commit 5fcf03e
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Showing 5 changed files with 2,107 additions and 178 deletions.
diff --git a/examples/Noise2Seg_2D/DSB2018_Noise2Seg_Example.ipynb b/examples/Noise2Seg_2D/DSB2018_Noise2Seg_Example.ipynb
@@ -2,17 +2,9 @@
  "cells": [
   {
    "cell_type": "code",
-   "execution_count": 1,
+   "execution_count": null,
    "metadata": {},
-   "outputs": [
-    {
-     "name": "stderr",
-     "output_type": "stream",
-     "text": [
-      "Using TensorFlow backend.\n"
-     ]
-    }
-   ],
+   "outputs": [],
    "source": [
     "%load_ext autoreload\n",
     "%autoreload 2\n",
@@ -39,7 +31,9 @@
   {
    "cell_type": "code",
    "execution_count": 2,
-   "metadata": {},
+   "metadata": {
+    "collapsed": true
+   },
    "outputs": [],
    "source": [
     "# create a folder for our data\n",
@@ -58,7 +52,9 @@
   {
    "cell_type": "code",
    "execution_count": 3,
-   "metadata": {},
+   "metadata": {
+    "collapsed": true
+   },
    "outputs": [],
    "source": [
     "trainval_data =  np.load('data/DSB/train_data/dsb2018_TrainVal40.npz')\n",
@@ -616,7 +612,9 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "metadata": {},
+   "metadata": {
+    "collapsed": true
+   },
    "outputs": [],
    "source": [
     "from noise2seg.utils.compute_precision_threshold import "
@@ -647,7 +645,9 @@
   {
    "cell_type": "code",
    "execution_count": null,
-   "metadata": {},
+   "metadata": {
+    "collapsed": true
+   },
    "outputs": [],
    "source": []
   }
@@ -668,7 +668,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.6.8"
+   "version": "3.6.1"
   }
  },
  "nbformat": 4,

diff --git a/figures/Figures_weightScheduling_AP.ipynb b/figures/Figures_weightScheduling_AP.ipynb
diff --git a/figures/Figures_weightScheduling_SEG.ipynb b/figures/Figures_weightScheduling_SEG.ipynb
diff --git a/figures/Figures_weightedDenoising.ipynb b/figures/Figures_weightedDenoising.ipynb
@@ -167,7 +167,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 8,
+   "execution_count": 2,
    "metadata": {
     "collapsed": true
    },
@@ -186,7 +186,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 9,
+   "execution_count": 4,
    "metadata": {
     "collapsed": true
    },
@@ -217,7 +217,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 10,
+   "execution_count": 5,
    "metadata": {
     "collapsed": true
    },
@@ -229,7 +229,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 11,
+   "execution_count": 6,
    "metadata": {},
    "outputs": [
     {
@@ -238,7 +238,7 @@
        "304.0"
       ]
      },
-     "execution_count": 11,
+     "execution_count": 6,
      "metadata": {},
      "output_type": "execute_result"
     }