build(deps): bump noodles from 0.57.0 to 0.58.0

Bumps [noodles](https://github.com/zaeleus/noodles) from 0.57.0 to 0.58.0. - [Commits](zaeleus/noodles@noodles-0.57.0...noodles-0.58.0) --- updated-dependencies: - dependency-name: noodles dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]>
wheretrue · Nov 14, 2023 · e7e0270 · e7e0270
1 parent eba03bb
commit e7e0270
Show file tree

Hide file tree

Showing 6 changed files with 25 additions and 25 deletions.
diff --git a/Cargo.lock b/Cargo.lock
diff --git a/exon-benchmarks/Cargo.toml b/exon-benchmarks/Cargo.toml
@@ -12,7 +12,7 @@ version.workspace = true
 clap = {version = "4.4.8", features = ["derive"]}
 datafusion = {workspace = true}
 exon = {path = "../exon/exon-core", features = ["all"]}
-noodles = {version = "0.57", features = ["core", "vcf", "bgzf"]}
+noodles = {version = "0.58", features = ["core", "vcf", "bgzf"]}
 tokio = {version = "1", features = ["full"]}
 tracing = "0.1.40"
 tracing-subscriber = "0.3.17"
diff --git a/exon/exon-bam/Cargo.toml b/exon/exon-bam/Cargo.toml
@@ -14,6 +14,6 @@ version = {workspace = true}
 arrow = {workspace = true}
 futures = {workspace = true}
 itertools = "0.11.0"
-noodles = {version = "0.57", features = ["core", "async", "bam", "sam", "bgzf"]}
+noodles = {version = "0.58", features = ["core", "async", "bam", "sam", "bgzf"]}
 object_store = {workspace = true}
 tokio = {workspace = true}
diff --git a/exon/exon-core/Cargo.toml b/exon/exon-core/Cargo.toml
@@ -27,7 +27,7 @@ flate2 = {version = "1.0.28", optional = true}
 futures = {workspace = true}
 gb-io = {version = "0.7.1", optional = true}
 itertools = "0.11.0"
-noodles = {version = "0.57", features = ["bed", "tabix", "core", "async", "sam", "fastq", "bcf", "vcf", "bgzf", "csi", "gtf"]}
+noodles = {version = "0.58", features = ["bed", "tabix", "core", "async", "sam", "fastq", "bcf", "vcf", "bgzf", "csi", "gtf"]}
 num_cpus = "1.16.0"
 object_store = {workspace = true, features = ["aws"]}
 pin-project = {version = "1.1.3", optional = true}

diff --git a/exon/exon-fasta/Cargo.toml b/exon/exon-fasta/Cargo.toml
@@ -15,7 +15,7 @@ arrow = {workspace = true}
 exon-common = {path = "../exon-common", version = "0.3.9"}
 futures = {workspace = true}
 itertools = "0.11.0"
-noodles = {version = "0.57", features = ["core", "async", "fasta"]}
+noodles = {version = "0.58", features = ["core", "async", "fasta"]}
 object_store = {workspace = true}
 tokio = {workspace = true}
 tokio-util = {workspace = true}

diff --git a/exon/exon-gff/Cargo.toml b/exon/exon-gff/Cargo.toml
@@ -14,7 +14,7 @@ version.workspace = true
 arrow = {workspace = true}
 exon-common = {path = "../exon-common", version = "0.3.9"}
 futures = {workspace = true}
-noodles = {version = "0.57", features = ["gff"]}
+noodles = {version = "0.58", features = ["gff"]}
 object_store = {workspace = true}
 tokio = {workspace = true}
 tokio-util = {workspace = true}