Skip to content

Commit

Permalink
Merge pull request #364 from weecology/devdocs
Browse files Browse the repository at this point in the history
minor doc edits
  • Loading branch information
juniperlsimonis authored May 23, 2023
2 parents abc04a6 + 17d5551 commit a35a772
Show file tree
Hide file tree
Showing 4 changed files with 19 additions and 12 deletions.
2 changes: 1 addition & 1 deletion DESCRIPTION
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
Package: portalcasting
Title: Model and Forecast Portal Rodent Dynamics
Version: 0.60.0
Version: 0.60.1
Authors@R: c(
person(c("Juniper", "L."), "Simonis",
email = "[email protected]", role = c("aut", "cre"),
Expand Down
17 changes: 11 additions & 6 deletions NEWS.md
Original file line number Diff line number Diff line change
Expand Up @@ -2,6 +2,11 @@

Version numbers follow [Semantic Versioning](https://semver.org/).

# [portalcasting 0.60.1](https://github.com/weecology/portalcasting/releases/tag/v0.60.1)
*5-22-2023*

## Minor doc edits

# [portalcasting 0.60.0](https://github.com/weecology/portalcasting/releases/tag/v0.60.0)
*5-19-2023*

Expand All @@ -12,16 +17,16 @@ Version numbers follow [Semantic Versioning](https://semver.org/).
# [portalcasting 0.59.0](https://github.com/weecology/portalcasting/releases/tag/v0.59.0)
*5-18-2023*

## Inclduing curl in the Dockerfile
* thought it was installed, but it isnt in tidyverse, just verse
## Including curl in the Dockerfile
* thought it was installed, but it isn't in tidyverse, just verse

# [portalcasting 0.58.0](https://github.com/weecology/portalcasting/releases/tag/v0.58.0)
*5-18-2023*

## Editing documentation
* Auto templates for issues and prs
* Auto templates for issues and PRs

## Inclduing git2r in the package
## Including git2r in the package
* Was removed accidentally from dockerfile causing breaks in main repo, seeing if it works to be in the package itself

# [portalcasting 0.57.0](https://github.com/weecology/portalcasting/releases/tag/v0.57.0)
Expand Down Expand Up @@ -1049,8 +1054,8 @@ the forecast date with a time stamp as well.
* Developed this changelog as part of the package.

## Support documents
* Added [code of conduct](https://github.com/weecology/portalcasting/blob/master/CODE_OF_CONDUCT.md)
and [contribution guidelines](https://github.com/weecology/portalcasting/blob/master/CONTRIBUTING.md)
* Added [code of conduct](https://github.com/weecology/portalcasting/blob/main/.github/CODE_OF_CONDUCT.md)
and [contribution guidelines](https://github.com/weecology/portalcasting/blob/main/.github/CONTRIBUTING.md)
to the repository.

# [portalcasting 0.1.1](https://github.com/weecology/portalcasting/commit/05ed76f76a82f32a5a3120eb7c9ef0dc95bd8ae4)
Expand Down
9 changes: 4 additions & 5 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@

[![R-CMD-check](https://github.com/weecology/portalcasting/actions/workflows/r-cmd-check.yaml/badge.svg)](https://github.com/weecology/portalcasting/actions/workflows/r-cmd-check.yaml)
[![Docker](https://github.com/weecology/portalcasting/actions/workflows/docker-publish.yml/badge.svg)](https://github.com/weecology/portalcasting/actions/workflows/docker-publish.yml)
[![Codecov test coverage](https://img.shields.io/codecov/c/github/weecology/portalcasting/main.svg)](https://codecov.io/github/weecology/portalcasting/branch/main)
[![Codecov test coverage](https://img.shields.io/codecov/c/github/weecology/portalcasting/main.svg)](https://app.codecov.io/github/weecology/portalcasting/branch/main)
[![Lifecycle:maturing](https://img.shields.io/badge/lifecycle-maturing-blue.svg)](https://lifecycle.r-lib.org/articles/stages.html)
[![Project Status: Active – The project has reached a stable, usable state and is being actively developed.](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active)
[![License](http://img.shields.io/badge/license-MIT-blue.svg)](https://raw.githubusercontent.com/weecology/portalPredictions/master/LICENSE)
Expand Down Expand Up @@ -34,8 +34,7 @@ We leverage a [software container](https://en.wikipedia.org/wiki/Operating-syste
Presently, we use a [Docker](https://hub.docker.com/r/weecology/portalcasting) image of the software environment to create a container for running the code.
The image is automatically rebuilt when there is a new `portalcasting` release, tagged with both the `latest` and version-specific (`vX.X.X`) tags, and pushed to [DockerHub](https://hub.docker.com/r/weecology/portalcasting).

Because the `latest` image is updated with releases, the current master branch code in `portalcasting` is not necessarily always being executed within the [predictions repository](https://github.com/weecology/portalPredictions).
A development image (`dev`) is built from the master branch of `portalcasting` at every push to facilitate testing and should not be considered stable.
Because the `latest` image is updated with releases, the current main branch code in `portalcasting` is typically, but not necessarily always, being executed within the [predictions repository](https://github.com/weecology/portalPredictions).

The API is moderately well defined at this point, but is still evolving.

Expand All @@ -62,14 +61,14 @@ from a shell on a computer with [Docker](https://www.docker.com/) installed.

Get started with the ["how to set up a Portal Predictions directory" vignette](https://weecology.github.io/portalcasting/articles/getting_started.html).

If you are interested in adding a model to the preloaded [set of models](https://weecology.github.io/portalcasting/articles/current_models.html), see the ["adding a model" vignette](https://weecology.github.io/portalcasting/articles/adding_model_and_data.html).
If you are interested in adding a model to the preloaded [set of models](https://weecology.github.io/portalcasting/articles/current_models.html), see the ["adding a model and data" vignette](https://weecology.github.io/portalcasting/articles/adding_model_and_data.html). That document also details how to expand the datasets available to new and existing models.


## Developer and Contributor notes

We welcome any contributions in form of models or pipeline changes.

For the workflow, please checkout the [contribution](CONTRIBUTING.md) and [code of conduct](CODE_OF_CONDUCT.md) pages.
For the workflow, please checkout the [contribution](.github/CONTRIBUTING.md) and [code of conduct](.github/CODE_OF_CONDUCT.md) pages.


## Acknowledgements
Expand Down
3 changes: 3 additions & 0 deletions inst/WORDLIST
Original file line number Diff line number Diff line change
Expand Up @@ -39,6 +39,7 @@ NMME
NaN
NaiveArima
ORCID
PRs
Plummer
PortalData
README
Expand Down Expand Up @@ -69,6 +70,7 @@ dataset's
dev
dir
dockerfile
dockerhub
dontrun
downscaled
dplyr
Expand Down Expand Up @@ -131,6 +133,7 @@ se
shinyapp
subfolders
summarization
tidyverse
timeseries
tscount
tsglm
Expand Down

0 comments on commit a35a772

Please sign in to comment.