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increase memory of quast #1073

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increase memory of quast #1073

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afc699d
increase memory
paulzierep Jan 15, 2024
5c64239
increase only for assembly
paulzierep Jan 31, 2024
a236b9f
linting
paulzierep Jan 31, 2024
28febb1
linting
paulzierep Jan 31, 2024
cb1672c
linting
paulzierep Jan 31, 2024
30d3687
Update tools.yml
bgruening Jan 31, 2024
56915aa
Update tools.yml
bgruening Jan 31, 2024
280922e
Update tools.yml
bgruening Jan 31, 2024
8f1a1ef
Fix YAML nested mappings
sanjaysrikakulam Feb 1, 2024
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4 changes: 2 additions & 2 deletions files/galaxy/tpv/tools.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -735,11 +735,11 @@

toolshed.g2.bx.psu.edu/repos/iuc/quast/quast/.*:
rules:
if: |
helpers.job_args_match(job, app, {'assembly': {'type': 'Metagenome'}})
- id: metagenome
if: helpers.job_args_match(job, app, {'assembly': {'type': 'Metagenome'}})
cores: 20
mem: 80

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741:5 [indentation] wrong indentation: expected 6 but found 4
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@mira-miracoli mira-miracoli Feb 2, 2024 •
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could it be assembly.type?
(I just briefly had a look in the wrapper, I coud also be wrong


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742:55 syntax error: mapping values are not allowed here (syntax)
toolshed.g2.bx.psu.edu/repos/devteam/freebayes/freebayes/.*:
# see https://github.com/usegalaxy-eu/infrastructure-playbook/pull/881 for some numbers
cores: 10
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