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Update mmseqs in plass
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@martin-steinegger
martin-steinegger committed Dec 5, 2019
1 parent 8874e31 commit 764a3e7
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion lib/mmseqs
Submodule mmseqs updated 19 files
+1 −0 data/CMakeLists.txt
+2 −2 data/createtaxdb.sh
+8 −8 src/MMseqsBase.cpp
+1 −0 src/commons/Command.cpp
+13 −7 src/commons/Command.h
+35 −0 src/commons/KSeqWrapper.cpp
+8 −0 src/commons/KSeqWrapper.h
+74 −50 src/commons/Parameters.cpp
+15 −6 src/commons/Parameters.h
+5 −0 src/commons/PatternCompiler.h
+4 −0 src/commons/SubstitutionMatrix.cpp
+8 −6 src/multihit/besthitperset.cpp
+68 −23 src/util/convertalignments.cpp
+33 −59 src/util/createdb.cpp
+328 −395 src/util/filterdb.cpp
+0 −121 src/util/filterdb.h
+21 −0 src/util/offsetalignment.cpp
+10 −1 src/workflow/EasySearch.cpp
+1 −1 util/regression

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