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[pre-commit.ci] auto fixes from pre-commit.com hooks
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pre-commit-ci[bot] committed Oct 11, 2024
1 parent 19e6a8a commit e0e7ea1
Showing 1 changed file with 4 additions and 2 deletions.
6 changes: 4 additions & 2 deletions docs/tutorials/tutorial_5k_bcr.ipynb
Original file line number Diff line number Diff line change
Expand Up @@ -220,9 +220,11 @@
"metadata": {},
"outputs": [],
"source": [
"ir.pp.index_chains(mdata, filter = [\"productive\",\"require_junction_aa\"])\n",
"ir.pp.index_chains(mdata, filter=[\"productive\", \"require_junction_aa\"])\n",
"ir.tl.chain_qc(mdata)\n",
"mu.pp.filter_obs(mdata, \"airr:chain_pairing\", lambda x: ~np.isin(x, [\"orphan VDJ\", \"orphan VJ\", \"ambiguous\",\"multichain\"]))"
"mu.pp.filter_obs(\n",
" mdata, \"airr:chain_pairing\", lambda x: ~np.isin(x, [\"orphan VDJ\", \"orphan VJ\", \"ambiguous\", \"multichain\"])\n",
")"
]
},
{
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