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v3.0.1

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@Neves-P Neves-P released this 29 Sep 16:14
· 49 commits to master since this release
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v3.0.1

Version 3.0.1 patches some inaccuracies in simulation functions, and deprecates expand_q_matrix(), as this was making some incorrect assumptions.

Breaking changes

  • The function expand_q_matrix() is now deprecated, please use q_doubletrans().

Minor changes

  • Added conditioning of simulation of complete trees on complete tree size.
  • Fixed some issues with setting pool_init_states.
  • Added option to return a histogram of simulated tree sizes, across all successful and failed trees.
  • Fix Zenodo metadata integration.
  • CITATION file uses new 'bibentry()`.