{AH} fix typo in test, update NEWS and release.rst for release

pysam-developers · Jul 28, 2018 · 9d83174 · 9d83174
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commit 9d83174
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diff --git a/NEWS b/NEWS
@@ -5,6 +5,17 @@ http://pysam.readthedocs.io/en/latest/release.html
 Release notes
 =============
 
+Release 0.15.0
+==============
+
+This release wraps htslib/samtools/bcftools version 1.9.0.
+
+* [#673] permit dash in chromosome name of region string
+* [#656] Support `text` when opening a SAM file for writing
+* [#658] return None in get_forward_sequence if sequence not in record
+* [#683] allow lower case bases in MD tags
+* Ensure that = and X CIGAR ops are treated the same as M
+
 Release 0.14.1
 ==============
 

diff --git a/doc/release.rst b/doc/release.rst
@@ -5,7 +5,13 @@ Release notes
 Release 0.15.0
 ==============
 
+This release wraps htslib/samtools/bcftools version 1.9.0.
+
 * [#673] permit dash in chromosome name of region string
+* [#656] Support `text` when opening a SAM file for writing
+* [#658] return None in get_forward_sequence if sequence not in record
+* [#683] allow lower case bases in MD tags
+* Ensure that = and X CIGAR ops are treated the same as M
 
 Release 0.14.1
 ==============

diff --git a/tests/AlignmentFilePileup_test.py b/tests/AlignmentFilePileup_test.py
@@ -311,7 +311,7 @@ def testStart(self):
     def testTruncate(self):
         '''see issue 107.'''
         # note that ranges in regions start from 1
-        p = self.samfile.pileup(region='chr1:170:172', truncate=True)
+        p = self.samfile.pileup(region='chr1:170-172', truncate=True)
         columns = [x.reference_pos for x in p]
         self.assertEqual(len(columns), 3)
         self.assertEqual(columns, [169, 170, 171])