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@janclemenslab Neural Computation and Behavior

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    28 repositories

    • anurogryllus-resonance

      Public
      Code for Mann et al. 2024
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Dec 9, 2024Dec 9, 2024

    • janclemenslab.github.io

      Public
      lab website
      HTML
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 8, 2024Dec 8, 2024

    • xarray-behave

      Public
      Data format and GUI for working with multi-modal behavioral data
      xarraypythongui
      Python
      •
      Apache License 2.0
      •2•7•2•0•Updated Dec 6, 2024Dec 6, 2024

    • staged-recipes

      Public
      A place to submit conda recipes before they become fully fledged conda-forge feedstocks
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •5k•0•0•0•Updated Dec 6, 2024Dec 6, 2024

    • das

      Public
      Deep Audio Segmenter
      deep-learningannotationtensorflowclassificationsegmentationsong
      Python
      •
      Apache License 2.0
      •10•28•8•0•Updated Nov 27, 2024Nov 27, 2024

    • neu715

      Public
      Neu715 - Neuroscientific Data Analysis using Python
      Jupyter Notebook
      •0•0•0•0•Updated Nov 20, 2024Nov 20, 2024

    • ca_utils

      Public
      Tools for recording and analyzing for Ca data
      scanimage
      Python
      •0•0•4•0•Updated Nov 12, 2024Nov 12, 2024

    • samplestamps

      Public
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • napari-video

      Public
      Napari plugin for working with video files.
      videoopencvnapari-plugin
      Jupyter Notebook
      •
      MIT License
      •3•13•1•0•Updated Oct 13, 2024Oct 13, 2024

    • etho

      Public
      Python
      •0•0•0•0•Updated Aug 14, 2024Aug 14, 2024

    • etho_annotator

      Public
      Jupyter Notebook
      •
      Apache License 2.0
      •0•0•0•0•Updated Feb 6, 2024Feb 6, 2024

    • conda-build-publish-action

      Public
      Github Action to build and deploy conda package to anaconda.org
      Shell
      •
      MIT License
      •63•0•0•0•Updated Feb 10, 2023Feb 10, 2023

    • .github

      Public
      0•0•0•0•Updated Nov 27, 2022Nov 27, 2022

    • ethotracker

      Public
      Python
      •0•0•0•0•Updated Aug 11, 2022Aug 11, 2022

    • das_unsupervised

      Public
      Deep Audio Segmenter, unsupervised
      Python
      •
      MIT License
      •1•10•0•0•Updated Jan 29, 2022Jan 29, 2022

    • das-auto

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Jan 21, 2022Jan 21, 2022

    • das-menagerie

      Public
      Repository for DAS models fitted for different species.
      Jupyter Notebook
      •0•4•0•0•Updated Jan 12, 2022Jan 12, 2022

    • cookiecutter_cluster-template

      Public
      cookiecutterslurmconda
      Shell
      •
      Apache License 2.0
      •0•1•0•0•Updated Dec 18, 2021Dec 18, 2021

    • cricketnet

      Public
      MATLAB
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Nov 17, 2021Nov 17, 2021

    • pyGLMHMM

      Public archive
      A Python implementation of GLM-HMM (port of https://github.com/murthylab/GLMHMM)
      Python
      •2•4•0•0•Updated Nov 13, 2021Nov 13, 2021

    • glm_utils

      Public
      Python
      •
      MIT License
      •2•4•0•0•Updated Jun 8, 2021Jun 8, 2021

    • quadratic-adaptive

      Public
      Code and data for Clemens & Murthy (2021)
      MATLAB
      •0•0•0•0•Updated Jun 7, 2021Jun 7, 2021

    • napari-tifffile-reader

      Public
      A napari reader plugin for tiff images.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •5•0•0•0•Updated Apr 25, 2021Apr 25, 2021

    • pybmt

      Public
      Python Ball Motion Tracking (pymbt): A python interface for FicTrac (https://github.com/rjdmoore/fictrac)
      Python
      •
      Other
      •5•0•0•0•Updated Sep 10, 2020Sep 10, 2020

    • snakemake-workflows

      Public
      snakemake workflows
      Python
      •
      MIT License
      •0•0•0•0•Updated Jul 25, 2020Jul 25, 2020

    • milton

      Public
      Obfuscate and restore filenames for blinded annotation.
      Python
      •
      MIT License
      •0•0•0•0•Updated Jun 25, 2020Jun 25, 2020

    • leap_utils

      Public
      Jupyter Notebook
      •1•0•0•0•Updated Jul 18, 2019Jul 18, 2019

    • dataloader

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jan 4, 2019Jan 4, 2019