v2.5.2 - Minor Release

CHANGES IN VERSION 2.5.2

NEW FEATURES

o New quality control plots, i.e. duplicates level, short/long range interactions, fragment size

SIGNIFICANT USER-VISIBLE CHANGES

o HiC-Pro can now be run from BAM aligned files

o Stepwise analysis can now be run in addition to the parallel mode

o Additional checks when running the pipeline

BUG FIXES

o Bug fixed when HiC-Pro is run with relative path

o Bug fixed in mergeSAM.py in case of duplicated reference in the SAM header

o Check PREFIX installation variable during installation process