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TableInfo: biosample_disease.tsv

abradyIGS edited this page Sep 3, 2021 · 10 revisions

Association between a biosample and a Disease Ontology term

If populated, biosample_from_subject.tsv will contain one row for every biosample linked to a subject from which it was taken.

All fields are required: this table can be empty (header-row only), but any non-header rows must leave no fields blank.

Some examples:

  • If you don't have any biosamples associated with source subjects, this table should be left empty.
  • If you have exactly one biosample taken from each of your subjects, this table will have the same number of rows as subject.tsv
  • If you have five biosamples taken from each subject, this table will have five times as many rows as subject.tsv
Field Field Description Required? Field Value Type Extra Info
biosample_id_namespace Identifier namespace for this biosample Required string This will be the value of id_namespace in the row in biosample.tsv corresponding to the biosample referenced in this row. If your program has not registered multiple CFDE identifier namnespaces, this will be exactly the same value for all rows.
biosample_local_id The ID of this biosample Required string This will be the value of local_id in the row in biosample.tsv corresponding to the biosample referenced in this row.
disease A Disease Ontology CV term describing this disease Required string
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