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Bump dev version
…re-template-merge-2.9
Co-authored-by: LaurenceKuhl <[email protected]>
Important! Template update for nf-core/tools v2.9
Use `Channel.fromSamplesheet()` from `nf-validation` plugin
Add versions to all modules
mirpedrol
reviewed
Nov 13, 2023
LaurenceKuhl
commented
Nov 13, 2023
Co-authored-by: LaurenceKuhl <[email protected]>
|
@nf-core-bot fix linting |
| cat <<-END_VERSIONS > versions.yml | ||
| "${task.process}": | ||
| python: \$(python --version | sed 's/Python //g') | ||
| BAGEL2: \$( BAGEL.py version | grep -o 'Version: [0-9.]*' | awk '{print \$2}' | grep -v '^\$') |
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I don't see bagel being installed with conda which package does it come from?
mirpedrol
reviewed
Nov 14, 2023
Co-authored-by: Friederike Hanssen <[email protected]>
mirpedrol
reviewed
Nov 14, 2023
add licenses to template scripts
Delete empty lines
FriederikeHanssen
approved these changes
Nov 14, 2023
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PR checklist
nf-core lint).nextflow run . -profile test,docker --outdir <OUTDIR>).docs/usage.mdis updated.docs/output.mdis updated.CHANGELOG.mdis updated.README.mdis updated (including new tool citations and authors/contributors).