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added some changelog and already bumped the version, although there s…
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,49 +1,58 @@ | ||
| - V 0.2.1.2: Maintenance: Switched to a newer compiler/resolver version, lifted some dependency restrictions, ran stylish-haskell on the entire codebase, updated the github actions, deprecated the haddock documentation for the dev version on GitHub | ||
| - V 0.2.1.1: Lifted some restrictions regarding the upper version bounds of dependencies | ||
| - V 0.2.1.0: Added a mechanism to detect terminal encoding and fall back on a simpler CLI plot if it is not UTF-8 | ||
| - V 0.2.0.1: Brought sample names back to default CLI output | ||
| - V 0.2.0.0: Added sum (and product) calibration and made the necessary changes to various interfaces (including CLI) to make this functionality accessible | ||
| - V 0.1.2.0: Added simple summary data (CalRangeSummary with calibrated median age + begin and end of 1- and 2-sigma ranges) to CalC14 and the cli output and plot. The latter got refactored and enhanced in the process. HDRs are now "ordered", so _hdrstart actually stores the older and _hdrstop the younger date | ||
| - V 0.1.1.0: Complete rewrite of the cli output handling to avoid a memory leak | ||
| - V 0.1.0.0: Switch to PVP versioning (https://pvp.haskell.org/) | ||
| - V 0.24.4: Removed big dependencies bytestring and statistics | ||
| - V 0.24.3: Multiple changes in .cabal to make cabal check happy | ||
| - V 0.24.2: Found and fixed another severe bug in renderCalCurve | ||
| - V 0.24.1: Fixed a serious bug in renderCalCurveMatrix | ||
| - V 0.24.0: Introduced more precise data types to distinguish years BP and years BC/AD | ||
| - V 0.23.1: Small changes to the instances of some general types | ||
| - V 0.23.0: Renamed multiple functions to make the naming of operations for parsing, reading, from-file reading, rendering and writing consistent across data types | ||
| - V 0.22.0: Changed the interface of the important calibrateDates function with a new config data type CalibrateDatesConf | ||
| - V 0.21.3: Refactored the calibration curve interpolation | ||
| - V 0.21.2: Introduced doctest and added some tiny examples/tests to try it out | ||
| - V 0.21.1: Split up the calibration module for better readability | ||
| - V 0.21.0: Added a neat CLI density plot for calibrated dates | ||
| - V 0.20.2: Some performance improvements for the calibration of large numbers of dates | ||
| - V 0.20.1: Better (parsing) error handling | ||
| - V 0.20.0: Added an option --allowOutside to allow for calibrations to run outside the range of the calibration curve | ||
| - V 0.19.0: Added functionality to filter out dates outside of the range of the calibration curve and report an error in this case | ||
| - V 0.18.0: Implemented calibration with a StudentT distribution to mimic Bchron and established that as the new default. Reimplemented the --method option of the CLI tool to reflect that change | ||
| - V 0.17.0: Changed argument order in CalCurve data type to adjust to the order in .14C files | ||
| - V 0.16.0: Refactoring in the library to simplify and clarify the interface | ||
| - V 0.15.0: Added another calibration algorithm (following the implementation by Andrew Parnell in Bchron) and a method switch for the CLI | ||
| - V 0.14.0: Introduced strictness, which brought a significant increase in performance. See the discussion here: https://old.reddit.com/r/haskell/comments/picjy6/how_could_i_improve_the_performance_of_my/ | ||
| - V 0.13.0: Major rewrite with the vector library - includes multiple bugfixes, but is surprisingly slow | ||
| - V 0.12.0: Renamed some core functions | ||
| - V 0.11.0: Made calibration curve interpolation optional and turned it off by default | ||
| - V 0.10.0: Simplified CLI interface by dropping the "calibrate" subcommand (currycarbon is sufficient now) and by repurposing -q from --quickOut to --quiet | ||
| - V 0.9.0: Made --hdrFile output a lot more machine-readable | ||
| - V 0.8.0: Added option --calibrationCurveFile to calibrate with different calibration curves | ||
| - V 0.7.2: More documentation, small changes in code layout and renamed CLI module that provides runCalibrate | ||
| - V 0.7.1: Added type documentation with haddock and replaced the existing types with record types | ||
| - V 0.7.0: Changed the date input interface once more | ||
| - V 0.6.0: Changed the date input interface, because parenthesis can be part of valid lab numbers | ||
| - V 0.5.2: Fixed parallel evalutation (deepseq forced memory-intensive, non-lazy behaviour) | ||
| - V 0.5.1: Added github release action (copied from poseidon-hs) | ||
| - V 0.5.0: Added file input for dates to calibrate | ||
| - V 0.4.0: Made output calibrated dates negative numbers for BC and positive for AD - and adjusted HDR printing accordingly | ||
| - V 0.3.2: Some optimisation | ||
| - V 0.3.1: Added automatic filling of unknown sample names | ||
| - V 0.3.0: Simplified interface | ||
| - V 0.2.1: Removed ascii plot functionality | ||
| - V 0.2.0: Added parallel processing for the main calibration operation | ||
| - V 0.1.0: First basically working version | ||
| - V 0.3.0.0: Major update with multiple breaking changes and new features: | ||
| - Added a new mechanism to draw random age samples from a CalPDF (`sampleAgesFromCalPDF :: AgeSamplingConf -> CalPDF -> RandomAgeSample`). This is available from the command line with the options `--seed`, `-n`/`--nrSamples` and `samplesFile`. | ||
| - Added a new concept to the `CalExpr` data type: Age ranges with uniform probability for each year in the range (`TimeWindowBP` and `TimeWindowBCAD`). | ||
| - Reworked the encoding and evaluation mechanism for calibration expressions: | ||
| - Introduced the `NamedCalExpr` as a wrapper around `CalExpr` with an identifier and then adjusted the ID generation for `CalPDF`s to favour this identifier. | ||
| - Reworked the cli DSL to support a standardized configuration language syntax implemented in a new module `ParserHelpers.hs`. This introduces a set of flexible functions (`calExpr()`, `uncalC14()`, `rangeBP()`, `rangeBCAD()`, `sum()` and `product`) which generally complement the previously available syntax and operators. Unfortunately this change also breaks some expressions that were valid before and now require additional parentheses to pass. | ||
| - Added some unit tests to cover the increasingly complex DSL. | ||
| - Adjusted the rendering of the pretty, human-focussed command line output. | ||
| - Switched to a new GHC version (v9.4.7) and stackage resolver version (lts-21.17). | ||
| - V 0.2.1.2: Maintenance: Switched to a newer compiler/resolver version, lifted some dependency restrictions, ran stylish-haskell on the entire codebase, updated the github actions, deprecated the haddock documentation for the dev version on GitHub. | ||
| - V 0.2.1.1: Lifted some restrictions regarding the upper version bounds of dependencies. | ||
| - V 0.2.1.0: Added a mechanism to detect terminal encoding and fall back on a simpler CLI plot if it is not UTF-8. | ||
| - V 0.2.0.1: Brought sample names back to default CLI output. | ||
| - V 0.2.0.0: Added sum (and product) calibration and made the necessary changes to various interfaces (including CLI) to make this functionality accessible. | ||
| - V 0.1.2.0: Added simple summary data (`CalRangeSummary` with calibrated median age + begin and end of 1- and 2-sigma ranges) to `CalC14` and the cli output and plot. The latter got refactored and enhanced in the process. `HDR`s are now "ordered", so `_hdrstart` actually stores the older and `_hdrstop` the younger date. | ||
| - V 0.1.1.0: Complete rewrite of the cli output handling to avoid a memory leak. | ||
| - V 0.1.0.0: Switch to PVP versioning (https://pvp.haskell.org/). | ||
| - V 0.24.4: Removed big dependencies bytestring and statistics. | ||
| - V 0.24.3: Multiple changes in .cabal to make cabal check happy. | ||
| - V 0.24.2: Found and fixed another severe bug in `renderCalCurve`. | ||
| - V 0.24.1: Fixed a serious bug in `renderCalCurveMatrix`. | ||
| - V 0.24.0: Introduced more precise data types to distinguish years BP and years BC/AD. | ||
| - V 0.23.1: Small changes to the instances of some general types. | ||
| - V 0.23.0: Renamed multiple functions to make the naming of operations for parsing, reading, from-file reading, rendering and writing consistent across data types. | ||
| - V 0.22.0: Changed the interface of the important `calibrateDates` function with a new config data type `CalibrateDatesConf`. | ||
| - V 0.21.3: Refactored the calibration curve interpolation. | ||
| - V 0.21.2: Introduced doctest and added some tiny examples/tests to try it out. | ||
| - V 0.21.1: Split up the calibration module for better readability. | ||
| - V 0.21.0: Added a neat CLI density plot for calibrated dates. | ||
| - V 0.20.2: Some performance improvements for the calibration of large numbers of dates. | ||
| - V 0.20.1: Better (parsing) error handling. | ||
| - V 0.20.0: Added an option `--allowOutside` to allow for calibrations to run outside the range of the calibration curve. | ||
| - V 0.19.0: Added functionality to filter out dates outside of the range of the calibration curve and report an error in this case. | ||
| - V 0.18.0: Implemented calibration with a StudentT distribution to mimic Bchron and established that as the new default. Reimplemented the `--method` option of the CLI tool to reflect that change. | ||
| - V 0.17.0: Changed argument order in the `CalCurve` data type to adjust to the order in `.14C` files. | ||
| - V 0.16.0: Refactoring in the library to simplify and clarify the interface. | ||
| - V 0.15.0: Added another calibration algorithm (following the implementation by Andrew Parnell in Bchron) and a method switch for the CLI. | ||
| - V 0.14.0: Introduced strictness, which brought a significant increase in performance. See the discussion here: https://old.reddit.com/r/haskell/comments/picjy6/how_could_i_improve_the_performance_of_my/. | ||
| - V 0.13.0: Major rewrite with the vector library - includes multiple bugfixes, but is surprisingly slow. | ||
| - V 0.12.0: Renamed some core functions. | ||
| - V 0.11.0: Made calibration curve interpolation optional and turned it off by default. | ||
| - V 0.10.0: Simplified CLI interface by dropping the `calibrate` subcommand (`currycarbon` is sufficient now) and by repurposing `-q` from `--quickOut` to `--quiet`. | ||
| - V 0.9.0: Made `--hdrFile` output a lot more machine-readable. | ||
| - V 0.8.0: Added option `--calibrationCurveFile` to calibrate with different calibration curves. | ||
| - V 0.7.2: More documentation, small changes in code layout and renamed CLI module that provides `runCalibrate`. | ||
| - V 0.7.1: Added type documentation with haddock and replaced the existing types with record types. | ||
| - V 0.7.0: Changed the date input interface once more. | ||
| - V 0.6.0: Changed the date input interface, because parenthesis can be part of valid lab numbers. | ||
| - V 0.5.2: Fixed parallel evaluation (deepseq forced memory-intensive, non-lazy behaviour). | ||
| - V 0.5.1: Added github release action (copied from poseidon-hs). | ||
| - V 0.5.0: Added file input for dates to calibrate. | ||
| - V 0.4.0: Made output calibrated dates negative numbers for BC and positive for AD - and adjusted HDR printing accordingly. | ||
| - V 0.3.2: Some optimisation. | ||
| - V 0.3.1: Added automatic filling of unknown sample names. | ||
| - V 0.3.0: Simplified interface. | ||
| - V 0.2.1: Removed ascii plot functionality. | ||
| - V 0.2.0: Added parallel processing for the main calibration operation. | ||
| - V 0.1.0: First basically working version. |
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