Convert statistics to models as well, minor cleanups, add annotations… #247
Workflow file for this run
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| name: MuPIF DB | |
| on: | |
| push: | |
| branches: [ "**" ] | |
| pull_request: | |
| branches: [ "**" ] | |
| jobs: | |
| test-linux: | |
| runs-on: ubuntu-22.04 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| # needs quotes so that float 3.10 does not get interpreted as 3.1 | |
| python-version: [ '3.10' ] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| wget -qO - https://www.mongodb.org/static/pgp/server-5.0.asc | sudo apt-key add - && echo "deb http://repo.mongodb.org/apt/debian buster/mongodb-org/5.0 main" | sudo tee /etc/apt/sources.list.d/mongodb-org-5.0.list | |
| sudo apt-get update && sudo apt-get -y install python3-wheel python3-pip mongodb-org | |
| python -m pip install -q flake8 | |
| pip install git+https://github.com/mupif/mupif.git@master | |
| pip install -r requirements.txt | |
| - name: Lint with flake8 | |
| run: | | |
| # stop the build if there are Python syntax errors or undefined names | |
| python -m flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics --exclude=obsolete | |
| - name: Start MongoDB | |
| run: | | |
| mkdir ./mongo-data | |
| /usr/bin/mongod --ipv6 --bind_ip_all --noauth --dbpath=./mongo-data --logpath=mongo.log & | |
| sleep 5 # mongo is required for our REST API | |
| cd mupifDB/api/edm; python dms3.py & | |
| sleep 5 | |
| - name: pytest (native) | |
| timeout-minutes: 2 | |
| run: | | |
| python -m pytest . | |
| - name: webapi test | |
| timeout-minutes: 2 | |
| run: | | |
| make & # runs all services, a separate instance | |
| sleep 10 | |
| # cd as webtest contains relative paths to uploaded files | |
| # run twice to also test workflow version bumping | |
| cd tools && bash webtest.sh && bash webtest.sh | |
| # | |
| kill $! # terminate make |