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15 changes: 15 additions & 0 deletions Gemfile
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source "https://rubygems.org"

git_source(:github) {|repo_name| "https://github.com/#{repo_name}" }

gem 'jekyll'

group :jekyll_plugins do
gem 'github-pages'
gem 'jekyll-remote-theme'
gem 'jekyll-include-cache'
gem 'webrick'
end

# gem "rails"

26 changes: 26 additions & 0 deletions README.md
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# PMLR 252

To suggest fixes to this volume please make a pull request containing the changes requested and a justification for the changes.

To edit the details of this conference work edit the [_config.yml](./_config.yml) file and submit a pull request.

To make changes to the individual paper details, edit the associated paper file in the [./_posts](./_posts) subdirectory.

For details of how to publish in PMLR please check https://proceedings.mlr.press/faq.html

For details of what is required to submit a proceedings please check https://proceedings.mlr.press/spec.html



Published as Volume 252 by the Proceedings of Machine Learning Research on 25 November 2024.

Volume Edited by:
* Kaivalya Deshpande
* Madalina Fiterau
* Shalmali Joshi
* Zachary Lipton
* Rajesh Ranganath
* Iñigo Urteaga

Series Editors:
* Neil D. Lawrence
92 changes: 92 additions & 0 deletions _config.yml
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---
booktitle: Proceedings of the 9th Machine Learning for Healthcare Conference
volume: '252'
shortname: MLHC
conference_number: '9'
year: '2024'
start: &1 2024-08-16
end: 2024-08-17
published: 2024-11-25
url: https://proceedings.mlr.press
layout: proceedings
series: Proceedings of Machine Learning Research
publisher: PMLR
issn: 2640-3498
id: MLHC-2024
month: 0
cycles: false
bibtex_editor: Deshpande, Kaivalya and Fiterau, Madalina and Joshi, Shalmali and Lipton,
Zachary and Ranganath, Rajesh and Urteaga, I\~nigo
editor:
- given: Kaivalya
family: Deshpande
- given: Madalina
family: Fiterau
- given: Shalmali
family: Joshi
- given: Zachary
family: Lipton
- given: Rajesh
family: Ranganath
- given: Iñigo
family: Urteaga
title: Proceedings of Machine Learning Research
description: |
Proceedings of the 9th Machine Learning for Healthcare Conference
Held in Toronto, Canada on 16-17 August 2024
Published as Volume 252 by the Proceedings of Machine Learning Research on 25 November 2024.
Volume Edited by:
Kaivalya Deshpande
Madalina Fiterau
Shalmali Joshi
Zachary Lipton
Rajesh Ranganath
Iñigo Urteaga
Series Editors:
Neil D. Lawrence
date_str: 16--17 Aug
author:
name: PMLR
baseurl: "/v252"
twitter_username: MLResearchPress
github_username: mlresearch
markdown: kramdown
exclude:
- README.md
- Gemfile
- ".gitignore"
plugins:
- jekyll-feed
- jekyll-seo-tag
- jekyll-remote-theme
remote_theme: mlresearch/jekyll-theme
style: pmlr
permalink: "/:title.html"
ghub:
edit: true
repository: v252
display:
copy_button:
bibtex: true
endnote: true
apa: true
comments: false
volume_type: Volume
volume_dir: v252
email: ''
conference:
name: Machine Learning for Healthcare Conference
url:
location: Toronto, Canada
dates:
- *1
- 2024-08-17
analytics:
google:
tracking_id: UA-92432422-1
orig_bibfile: "/Users/neil/mlresearch/v252/mlhc2024_accepted_submissions.bib"
# Site settings
# Original source: /Users/neil/mlresearch/v252/mlhc2024_accepted_submissions.bib
48 changes: 48 additions & 0 deletions _posts/2024-11-25-asiimwe24a.md
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---
title: 'MedAutoCorrect: Image-Conditioned Autocorrection in Medical Reporting'
abstract: 'In medical reporting, the accuracy of radiological reports, whether generated
by humans or machine learning algorithms, is critical. We tackle a new task in this
paper: image- conditioned autocorrection of inaccuracies within these reports. Using
the MIMIC-CXR dataset, we first intentionally introduce a diverse range of errors
into reports. Subsequently, we propose a two-stage framework capable of pinpointing
these errors and then making corrections, simulating an autocorrection process.
This method aims to address the short- comings of existing automated medical reporting
systems, like factual errors and incorrect conclusions, enhancing report reliability
in vital healthcare applications. Importantly, our approach could serve as a guardrail,
ensuring the accuracy and trustworthiness of automated report generation. Experiments
on established datasets and state of the art report generation models validate this
method’s potential in correcting medical reporting errors.'
openreview: iW9ItiwxyC
layout: inproceedings
series: Proceedings of Machine Learning Research
publisher: PMLR
issn: 2640-3498
id: asiimwe24a
month: 0
tex_title: 'MedAutoCorrect: Image-Conditioned Autocorrection in Medical Reporting'
cycles: false
bibtex_author: Asiimwe, Arnold Caleb and Coll-Vinent, Didac Suris and Rajpurkar, Pranav
and Vondrick, Carl
author:
- given: Arnold Caleb
family: Asiimwe
- given: Didac Suris
family: Coll-Vinent
- given: Pranav
family: Rajpurkar
- given: Carl
family: Vondrick
date: 2024-11-25
address:
container-title: Proceedings of the 9th Machine Learning for Healthcare Conference
volume: '252'
genre: inproceedings
issued:
date-parts:
- 2024
- 11
- 25
pdf: https://raw.githubusercontent.com/mlresearch/v252/main/assets/asiimwe24a/asiimwe24a.pdf
extras: []
# Format based on Martin Fenner's citeproc: https://blog.front-matter.io/posts/citeproc-yaml-for-bibliographies/
---
55 changes: 55 additions & 0 deletions _posts/2024-11-25-banerjee24a.md
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---
title: Direct Preference Optimization for Suppressing Hallucinated Prior Exams in
Radiology Report Generation
abstract: Recent advances in generative vision-language models (VLMs) have exciting
potential implications for AI in radiology, yet VLMs are also known to produce hallucinations,
nonsensical text, and other unwanted behaviors that can waste clinicians’ time and
cause patient harm. Drawing on recent work on direct preference optimization (DPO),
we propose a simple method for modifying the behavior of pretrained VLMs performing
radiology report generation by suppressing unwanted types of generations. We apply
our method to the prevention of hallucinations of prior exams, addressing a long-established
problem behavior in models performing chest X-ray report generation. Across our
experiments, we find that DPO fine-tuning achieves a 3.2-4.8x reduction in lines
hallucinating prior exams while maintaining model performance on clinical accuracy
metrics. Our work is, to the best of our knowledge, the first work to apply DPO
to medical VLMs, providing a data- and compute- efficient way to suppress problem
behaviors while maintaining overall clinical accuracy.
openreview: kvYYP1LfRq
layout: inproceedings
series: Proceedings of Machine Learning Research
publisher: PMLR
issn: 2640-3498
id: banerjee24a
month: 0
tex_title: Direct Preference Optimization for Suppressing Hallucinated Prior Exams
in Radiology Report Generation
cycles: false
bibtex_author: Banerjee, Oishi and Zhou, Hong-Yu and Wu, Kay and Adithan, Subathra
and Kwak, Stephen and Rajpurkar, Pranav
author:
- given: Oishi
family: Banerjee
- given: Hong-Yu
family: Zhou
- given: Kay
family: Wu
- given: Subathra
family: Adithan
- given: Stephen
family: Kwak
- given: Pranav
family: Rajpurkar
date: 2024-11-25
address:
container-title: Proceedings of the 9th Machine Learning for Healthcare Conference
volume: '252'
genre: inproceedings
issued:
date-parts:
- 2024
- 11
- 25
pdf: https://raw.githubusercontent.com/mlresearch/v252/main/assets/banerjee24a/banerjee24a.pdf
extras: []
# Format based on Martin Fenner's citeproc: https://blog.front-matter.io/posts/citeproc-yaml-for-bibliographies/
---
61 changes: 61 additions & 0 deletions _posts/2024-11-25-chan24a.md
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---
title: Leveraging LLMs for Multimodal Medical Time Series Analysis
abstract: 'The complexity and heterogeneity of data in many real-world applications
pose significant challenges for traditional machine learning and signal processing
techniques. For instance, in medicine, effective analysis of diverse physiological
signals is crucial for patient monitoring and clinical decision-making and yet highly
challenging. We introduce MedTsLLM, a general multimodal large language model (LLM)
framework that effectively integrates time series data and rich contextual information
in the form of text to analyze physiological signals, performing three tasks with
clinical relevance: semantic segmentation, boundary detection, and anomaly detection
in time series. These critical tasks enable deeper analysis of physiological signals
and can provide actionable insights for clinicians. We utilize a reprogramming layer
to align embeddings of time series patches with a pretrained LLM’s embedding space
and make effective use of raw time series, in conjunction with textual context.
Given the multivariate nature of medical datasets, we develop methods to handle
multiple covariates. We additionally tailor the text prompt to include patient-specific
information. Our model outperforms state-of-the-art baselines, including deep learning
models, other LLMs, and clinical methods across multiple medical domains, specifically
electrocardiograms and respiratory waveforms. MedTsLLM presents a promising step
towards harnessing the power of LLMs for medical time series analysis that can elevate
data-driven tools for clinicians and improve patient outcomes.'
openreview: W4ZxKk14HM
layout: inproceedings
series: Proceedings of Machine Learning Research
publisher: PMLR
issn: 2640-3498
id: chan24a
month: 0
tex_title: Leveraging {LLM}s for Multimodal Medical Time Series Analysis
cycles: false
bibtex_author: Chan, Nimeesha and Parker, Felix and Bennett, William C and Wu, Tianyi
and Jia, Mung Yao and MD, James Fackler and Ghobadi, Kimia
author:
- given: Nimeesha
family: Chan
- given: Felix
family: Parker
- given: William C
family: Bennett
- given: Tianyi
family: Wu
- given: Mung Yao
family: Jia
- given: James Fackler
family: MD
- given: Kimia
family: Ghobadi
date: 2024-11-25
address:
container-title: Proceedings of the 9th Machine Learning for Healthcare Conference
volume: '252'
genre: inproceedings
issued:
date-parts:
- 2024
- 11
- 25
pdf: https://raw.githubusercontent.com/mlresearch/v252/main/assets/chan24a/chan24a.pdf
extras: []
# Format based on Martin Fenner's citeproc: https://blog.front-matter.io/posts/citeproc-yaml-for-bibliographies/
---
74 changes: 74 additions & 0 deletions _posts/2024-11-25-chien24a.md
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---
title: 'Beyond Clinical Trials: Using Real World Evidence to Investigate Heterogeneous,
Time-Varying Treatment Effects'
abstract: Randomized controlled trials (RCTs), though essential for evaluating the
efficacy of novel treatments, are costly and time-intensive. Due to strict eligibility
criteria, RCTs may not adequately represent diverse patient populations, leading
to equity issues and limited generalizability. Additionally, conventional trial
analysis methods are limited by strict assumptions and biases. Real-world evidence
(RWE) offers a promising avenue to explore treatment effects beyond trial settings,
addressing gaps in representation and providing additional insights into patient
outcomes over time. We introduce TRIALSCOPE-X and TRIALSCOPE-XL, machine learning
pipelines designed to analyze treatment outcomes using RWE by mitigating biases
that arise from observational data and addressing the limitations of conventional
methods. We estimate causal, time-varying treatment effects across heterogeneous
patient populations and varied timeframes. Preliminary results investigating the
treatment benefit of Keytruda, a widely-used cancer immunotherapy drug, demonstrate
the utility of our methods in evaluating treatment outcomes under novel settings
and uncovering potential disparities. Our findings highlight the potential of RWE-based
analysis to provide data-driven insights that inform evidence-based medicine and
shape more inclusive and comprehensive clinical research, supplementing traditional
clinical trial findings.
openreview: wUruL3DqKB
layout: inproceedings
series: Proceedings of Machine Learning Research
publisher: PMLR
issn: 2640-3498
id: chien24a
month: 0
tex_title: 'Beyond Clinical Trials: Using Real World Evidence to Investigate Heterogeneous,
Time-Varying Treatment Effects'
cycles: false
bibtex_author: Chien, Isabel and Wong, Cliff and Gero, Zelalem and Bagga, Jaspreet
and Ueno, Risa and Turner, Richard E. and Weerasinghe, Roshanthi K. and Piening,
Brian and Naumann, Tristan and Bifulco, Carlo and Poon, Hoifung and Hern\'andez,
Javier Gonz\'alez
author:
- given: Isabel
family: Chien
- given: Cliff
family: Wong
- given: Zelalem
family: Gero
- given: Jaspreet
family: Bagga
- given: Risa
family: Ueno
- given: Richard E.
family: Turner
- given: Roshanthi K.
family: Weerasinghe
- given: Brian
family: Piening
- given: Tristan
family: Naumann
- given: Carlo
family: Bifulco
- given: Hoifung
family: Poon
- given: Javier González
family: Hernández
date: 2024-11-25
address:
container-title: Proceedings of the 9th Machine Learning for Healthcare Conference
volume: '252'
genre: inproceedings
issued:
date-parts:
- 2024
- 11
- 25
pdf: https://raw.githubusercontent.com/mlresearch/v252/main/assets/chien24a/chien24a.pdf
extras: []
# Format based on Martin Fenner's citeproc: https://blog.front-matter.io/posts/citeproc-yaml-for-bibliographies/
---
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