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Wildlife monitoring

Wildlife monitoring is essential for keeping track of animal movement patterns & population change. The tricky part however can be finding & identifying every species.

Wildlife monitoring project overview as stylised graphic

This project is a demonstration of using a raspberry Pi and camera, Apache Kafka, Kafka Connect to identify and classify animals. Using ksqlDB to see population trends over time and the display of real-time analytics on this data with Kibana dashboards. Plus instant alerting using Telegram to send me a push notification to my phone if we discover a rare animal

In action

When running end to end, the object detection, Kafka Connect and ksqlDB processing plus the Kibana dashboards look like this

Animation showing elephant object detection plus the Kibana dashboards

Setup Rasperry Pi / Kafka Producer

This code has been tested on a Raspberry Pi 4 and MacBook Pro (Intel) with Python 3.7.4 and pip 22.1.2

This example uses TensorFlow Lite with Python on a Raspberry Pi to perform real-time object detection using images streamed from the Pi Camera. Much inspiration taken from the TensorFlow Lite Python object detection example

Download the EfficientDet-Lite mode

Download a pre-trained TensorFlow Lite detection model - which can detect elepahnts, cats etc.,

curl -L 'https://tfhub.dev/tensorflow/lite-model/efficientdet/lite0/detection/metadata/1?lite-format=tflite'     -o efficientdet_lite0.tflite

Setup virtual python environment

Use a virtual python environment to keep dependancies seperate

python3 -m venv env
source env/bin/activate
python --version
pip --version

Install requirements

python3 -m pip install pip --upgrade
python3 -m pip install -r requirements.txt

Fixes

Fix for Library not loaded: ... libusb-1.0.0.dylib

brew install libusb

Fix for TypeError: create_from_options(): incompatible function arguments.

pip install tflite-support==0.4.0

Run detection loop

Run the detection loop using the camera

python3 detect.py

Run the detection loop using the sample video file

python detect.py --videoFile ./cat.mov

Image recognition with bounding boxes and JSON console overlay

Setup Kafka, Kafka Connect and Kibana

These instructions are for running Kafka, Kafka Connect and Kibana locally using docker containers

Download Kafka connect sinks

Download the http and elasticsearch Kafka connect sink adapters (note: licensed)

cd connect_plugin
unzip ~/Downloads/confluentinc-kafka-connect-http-*.zip
unzip ~/Downloads/confluentinc-kafka-connect-elasticsearch-*.zip
cd ..

Start docker containers

docker compose up -d

Configure brokers

Edit the file detect.ini for settings of kafka broker and name of camera

Check connector-plugins are avaiable

Check the http and elasticsearch Kafka connect sink adapters are available

curl -s "http://localhost:8083/connector-plugins" | jq '.'

Setup topics

Create Kafka topics and populate with dummy data

./01_create_topic

Setup KSQL streams

Connect to ksqlDB server and create streams

ksql
run script './02_ksql.ksql';

Load Elastic Dynamic Templates

Load Elastic Dynamic Templates - ensure fields suffixed with TIMESTAMP are created as dates

./03_elastic_dynamic_template

Setup Kafka connect sink to elastic

Ensure the animals and zoo topics are sent from kafka to elastic

./04_kafka_to_elastic_sink

Create indexes in Kibana

Create indexes in Kibana

./05_create_kibana_metadata.sh

Can check Kibana index by visiting http://localhost:5601/app/management/kibana/indexPatterns

Create a visulization

Go to http://localhost:5601/app/lens to create a visulization and dashboard

Or - go to http://localhost:5601/app/management/kibana/objects and select Import saved objects and upload 06_kibana_export.ndjson

A Kibana display line graph

Setup Telegram

To call Telegram you must use and create your own bot. Although we're not using this connector, these instructions for creating a bot are great steps to follow. You'll need to know the bot url and chat_id.

Push notification from Telegram application

Setup Kafka connect sink to HTTP

cp 07_teaddybear-telegram-sink-example.json 07_teaddybear-telegram-sink.json

And then edit 07_teaddybear-telegram-sink.json updating the bot url and chat_id

Setup Kafka connect sink to HTTP

Establish Kafka connect sink to HTTP for Telegram

./07_kafka_to_telegram_sink

End to end

Now everything is setup, it's time to run detection loop with Rasparry Pi producing results to Kafka. Pass the --enableKafka flag to write object detection as events

Run the detection loop using the camera

python3 detect.py --enableKafka

Run the detection loop using the sample video file

python detect.py --videoFile ./cat.mov --enableKafka

Video

YouTube Video describing Wildlife monitoring project

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  • Python 68.8%
  • Shell 31.2%