Build

Improve install stability #124

	# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
	# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

	name: Build

	on:
	push:
	pull_request:

	defaults:
	run:
	shell: bash -l {0}

	jobs:
	build:

	runs-on: ubuntu-latest
	strategy:
	matrix:
	python-version: ['3.6', '3.7', '3.8', '3.9', '3.10', '3.11']

	steps:

	- uses: actions/checkout@v3

	- name: Load apt packages
	run: \|
	sudo apt-get update
	sudo apt-get -y install git make g++ default-jre default-jdk zlib1g-dev

	- name: Install Louvain
	run: \|
	cd external
	tar -xzf louvain-generic.tar.gz
	cd gen-louvain
	make
	cd ../..

	- name: Install Leiden
	run: \|
	git clone https://github.com/vtraag/networkanalysis.git
	cd networkanalysis
	./gradlew build
	cd ..

	- name: Install Conda environment from metator.yaml
	uses: mamba-org/setup-micromamba@v1
	with:
	environment-file: metator.yaml
	generate-run-shell: true
	create-args: >-
	python=${{ matrix.python-version }}

	- name: Test with pytest
	run: \|
	micromamba activate metator
	export LOUVAIN_PATH=external/gen-louvain
	export LEIDEN_PATH=networkanalysis/build/libs/networkanalysis-1.2.0.jar
	pytest --pylint --pylint-error-types=EF --pylint-rcfile=.pylintrc --doctest-modules metator
	pytest --cov=metator
	codecov

Provide feedback