HC18-Automated-measurement-of-fetal-head-circumference

This is an example of the ultrasound imaging is used to measure the fetal head circumference (HC).

Prerequisities

The following dependencies are needed:

• numpy >= 1.11.1
• SimpleITK >=1.0.1
• opencv-python >=3.3.0
• tensorflow-gpu ==1.8.0
• pandas >=0.20.1
• scikit-learn >= 0.17.1

How to Use

1、Preprocess

• download ultrasound image data:https://zenodo.org/record/1327317
• convert annotation image to mask image,you can download here:https://pan.baidu.com/s/1NmmztKR0Omu1fKue7263Sw password：6ax7
• data augmentation:run the augtest.py

2、HC Segmentation

• the VNet2d model

• train and predict in the script of vnet2d_train.py and vnet2d_predict.py

3、trained model can download on here:https://pan.baidu.com/s/1ved3w6Tn4nwnBUDzxW8arw password：r0li

Result

• loss and accuracy,orange line is first trained,blue is second trained

Contact

• https://github.com/junqiangchen
• email: [email protected]
• Contact: junqiangChen
• WeChat Number: 1207173174
• WeChat Public number: 最新医学影像技术