Enable Intake GUI for thumbnails and geotiffs (#58)

* gui fixup * sat-search>=0.3 in binder config
intake · Aug 24, 2020 · 0fcde70 · 0fcde70
1 parent f4e636d
commit 0fcde70
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diff --git a/binder/environment.yml b/binder/environment.yml
@@ -1,19 +1,56 @@
-name: intake-stac
+# Intake GUI also requires jupyterlab extensions installed
+# jupyter labextension install @pyviz/jupyterlab_pyviz
+name: intake-stac-gui
 channels:
   - conda-forge
-  - informaticslab
 dependencies:
-  - python=3
+  - aiohttp
+  - autopep8
+  - black
   - boto3
+  - codecov
+  - coverage
+  - dask
+  - datashader
+  - distributed
+  - flake8
   - geopandas
+  - geoviews
+  - hvplot
   - intake
-  - intake_geopandas
+  - intake-geopandas
+  - intake-parquet
   - intake-xarray
-  - rasterio
-  - sat-stac
-  - sat-search
+  - ipykernel
+  - ipywidgets
+  - isort
+  - jupyterlab
+  - make
+  - matplotlib
+  - nbsphinx
   - netcdf4
+  - nodejs >=10.0.0
+  - numpy
+  - numpydoc
+  - pandoc
+  - panel
+  - pip
+  - pre_commit
+  - pytest
+  - pytest-cov
+  - pytest-icdiff
+  - python =3.7
+  - pytoml
+  - pyyaml
   - rasterio
+  - recommonmark
+  - requests
+  - sat-search>=0.3
+  - sat-stac
   - scikit-image
-  - matplotlib
-  - pip
+  - sphinx_rtd_theme
+  - sphinx >=1.6
+  - xarray
+  - pip:
+      - git+https://github.com/intake/intake-stac@master
+      - sphinx_copybutton
diff --git a/binder/postBuild b/binder/postBuild
@@ -1,5 +1,8 @@
 #!/bin/bash
-set -euo pipefail
 
-# Install development version of intake-stack
-pip install .
+jupyter labextension install --clean \
+                             @jupyter-widgets/jupyterlab-manager \
+                             @jupyterlab/geojson-extension \
+                             @pyviz/jupyterlab_pyviz
+
+#EOF
diff --git a/ci/environment-dev-3.6.yml b/ci/environment-dev-3.6.yml
@@ -36,11 +36,11 @@ dependencies:
   - rasterio
   - recommonmark
   - requests
+  - sat-search>=0.3
   - sat-stac
   - scikit-image
   - sphinx_rtd_theme
   - sphinx>=1.6
   - xarray
   - pip:
-      - sat-search==0.3.0rc1
       - sphinx_copybutton
diff --git a/ci/environment-dev-3.7.yml b/ci/environment-dev-3.7.yml
@@ -36,11 +36,11 @@ dependencies:
   - rasterio
   - recommonmark
   - requests
+  - sat-search>=0.3
   - sat-stac
   - scikit-image
   - sphinx_rtd_theme
   - sphinx>=1.6
   - xarray
   - pip:
-      - sat-search==0.3.0rc1
       - sphinx_copybutton
diff --git a/ci/environment-gui-3.7.yml b/ci/environment-gui-3.7.yml
@@ -0,0 +1,58 @@
+# Intake GUI also requires jupyterlab extensions installed
+# conda env create -f ci/environment-gui-3.7.yml
+# conda activate intake-stac-gui
+# pip install -e .
+# jupyter labextension install @pyviz/jupyterlab_pyviz
+name: intake-stac-gui
+channels:
+  - conda-forge
+dependencies:
+  - aiohttp
+  - autopep8
+  - black
+  - boto3
+  - codecov
+  - coverage
+  - dask
+  - datashader
+  - distributed
+  - flake8
+  - geopandas
+  - geoviews
+  - hvplot
+  - intake
+  - intake-geopandas
+  - intake-parquet
+  - intake-xarray
+  - ipykernel
+  - ipywidgets
+  - isort
+  - jupyterlab
+  - make
+  - matplotlib
+  - nbsphinx
+  - netcdf4
+  - nodejs >=10.0.0
+  - numpy
+  - numpydoc
+  - pandoc
+  - panel
+  - pip
+  - pre_commit
+  - pytest
+  - pytest-cov
+  - pytest-icdiff
+  - python =3.7
+  - pytoml
+  - pyyaml
+  - rasterio
+  - recommonmark
+  - requests
+  - sat-search>=0.3
+  - sat-stac
+  - scikit-image
+  - sphinx_rtd_theme
+  - sphinx >=1.6
+  - xarray
+  - pip:
+      - sphinx_copybutton
diff --git a/examples/aws-earth-search.ipynb b/examples/aws-earth-search.ipynb
@@ -18,8 +18,7 @@
    "source": [
     "%matplotlib inline\n",
     "import intake\n",
-    "import satsearch\n",
-    "import os"
+    "import satsearch"
    ]
   },
   {
@@ -31,10 +30,11 @@
     "bbox = [35.48, -3.24, 35.58, -3.14] # (min lon, min lat, max lon, max lat)\n",
     "dates = '2020-07-01/2020-08-15'\n",
     "\n",
-    "os.environ['STAC_API_URL'] = 'https://earth-search.aws.element84.com/v0' # \"stac_version\":\"1.0.0-beta.2\"\n",
-    "results = satsearch.Search.search(collections=['sentinel-s2-l2a-cogs'], # note collection='sentinel-s2-l2a-cogs' doesn't work\n",
+    "URL='https://earth-search.aws.element84.com/v0'\n",
+    "results = satsearch.Search.search(url=URL,\n",
+    "                                  collections=['sentinel-s2-l2a-cogs'], # note collection='sentinel-s2-l2a-cogs' doesn't work\n",
     "                                  datetime=dates,\n",
-    "                                  bbox=bbox,                                  \n",
+    "                                  bbox=bbox,    \n",
     "                                  sort=['<datetime'])"
    ]
   },
@@ -68,15 +68,6 @@
     "catalog = intake.open_stac_item_collection(items)"
    ]
   },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "metadata": {},
-   "outputs": [],
-   "source": [
-    "type(catalog)"
-   ]
-  },
   {
    "cell_type": "code",
    "execution_count": null,
@@ -188,14 +179,7 @@
    "execution_count": null,
    "metadata": {},
    "outputs": [],
-   "source": [
-    "# Interactive plot with hvplot and datashader\n",
-    "#import hvplot.xarray\n",
-    "#NDVI.hvplot.image(x='x', y='y',\n",
-    "#                  cmap='BrBG', clim=(-1,1),\n",
-    "#                  rasterize=True, dynamic=True,\n",
-    "#                  width=700, height=500)"
-   ]
+   "source": []
   }
  ],
  "metadata": {