Expose sparse NNLS to Python (#42) #141
Workflow file for this run
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| on: | |
| push: | |
| pull_request: | |
| branches: | |
| - master | |
| jobs: | |
| mypy: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.11" | |
| - run: pip install numpy mypy | |
| - run: sudo apt-get install libsuitesparse-dev libbtbb-dev liblapack-dev libcfitsio-dev libmetis-dev libgsl-dev | |
| # NB: force install to provisioned Python's PYTHONPATH | |
| - run: cmake -DPython_EXECUTABLE=$(which python) -DCMAKE_INSTALL_PREFIX=$(dirname $(dirname $(which pip))) && make pyphotospline && sudo make install | |
| - run: mypy test/*.py | |
| linux: | |
| runs-on: ubuntu-latest | |
| needs: mypy | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: | |
| - 3.8 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - run: pip install numpy scipy | |
| - run: sudo apt-get install libsuitesparse-dev libbtbb-dev liblapack-dev libcfitsio-dev libmetis-dev libgsl-dev | |
| - run: cmake -DPython_EXECUTABLE=$(which python) . && make && sudo make install | |
| - run: python -c "import photospline" | |
| - run: ctest --output-on-failure | |
| macos: | |
| runs-on: macos-latest | |
| needs: linux | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: | |
| - 3.8 | |
| - 3.9 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - run: pip install numpy scipy | |
| - run: brew install suite-sparse cfitsio gsl | |
| - run: cmake -DPython_EXECUTABLE=$(which python) . && make && make install | |
| - run: python -c "import photospline" | |
| - run: ctest --output-on-failure | |
| architecture-zoo: | |
| runs-on: ubuntu-latest | |
| needs: linux | |
| strategy: | |
| matrix: | |
| include: | |
| - arch: aarch64 | |
| distro: ubuntu20.04 | |
| - arch: ppc64le | |
| distro: ubuntu20.04 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: uraimo/[email protected] | |
| with: | |
| arch: ${{ matrix.arch }} | |
| distro: ${{ matrix.distro }} | |
| # cache install stage | |
| githubToken: ${{ github.token }} | |
| install: | | |
| apt-get update -q -y | |
| apt-get install -q -y cmake clang libsuitesparse-dev libbtbb-dev liblapack-dev libcfitsio-dev libmetis-dev libgsl-dev python3-dev python3-numpy python3-scipy | |
| run: | | |
| cmake -DPython_EXECUTABLE=$(which python3) . | |
| make | |
| make install | |
| python3 -c "import photospline" | |
| # ctest --output-on-failure | |