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[pre-commit.ci] pre-commit autoupdate #330

[pre-commit.ci] pre-commit autoupdate

[pre-commit.ci] pre-commit autoupdate #330

Workflow file for this run

name: Test
on:
push:
branches: [main]
pull_request:
branches: [main]
schedule:
- cron: "0 5 1,15 * *"
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
test:
runs-on: ${{ matrix.os }}
defaults:
run:
shell: bash -e {0} # -e to fail on error
strategy:
fail-fast: false
matrix:
include:
- os: ubuntu-latest
python: "3.10"
r: release
- os: ubuntu-latest
python: "3.12"
r: release
- os: ubuntu-latest
python: "3.12"
r: release
pip-flags: "--pre"
env:
OS: ${{ matrix.os }}
PYTHON: ${{ matrix.python }}
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python }}
cache: "pip"
cache-dependency-path: "**/pyproject.toml"
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.r }}
use-public-rspm: true
- name: Install test dependencies
run: |
python -m pip install --upgrade pip wheel
- name: Install dependencies
run: |
pip install ".[dev,test,copykat]"
- name: Install R dependencies
run: |
install.packages("pak", repos = sprintf("https://r-lib.github.io/p/pak/stable/%s/%s/%s", .Platform$pkgType, R.Version()$os, R.Version()$arch))
# TODO: use copykat version from february, latest version seens to have a bug...
pak::pkg_install(c('stringr', 'navinlabcode/copykat@674e331cf12ce14b62eaf6459f7c84a82fc4c775'))
shell: Rscript {0}
- name: Test
env:
MPLBACKEND: agg
PLATFORM: ${{ matrix.os }}
DISPLAY: :42
run: |
coverage run -m pytest -v --color=yes
- name: Report coverage
run: |
coverage report
- name: Upload coverage
uses: codecov/codecov-action@v3