CRISPR-MIP - a drop-in alternative for PCR in CRISPR screens for improved statistics

Reference

See our preprint for now; "CRISPR-MIP replaces PCR and reveals GC and oversampling bias in pooled CRISPR screens" - Martin Selinger, Iryna Yakovenko, Iqra Nazir, Johan Henriksson (2024) https://www.biorxiv.org/content/10.1101/2024.03.28.587082v1.full

Free software: MIT license

Name		Name	Last commit message	Last commit date
Latest commit History 5 Commits
count_subsample		count_subsample
imaging		imaging
out		out
sintov2022		sintov2022
README.md		README.md
fig2.R		fig2.R
fig3.ipynb		fig3.ipynb
fig4.R		fig4.R
prep_for_mageck.R		prep_for_mageck.R
simulate_UMI.ipynb		simulate_UMI.ipynb
umi_dedup_stats.ipynb		umi_dedup_stats.ipynb
umi_dist.csv		umi_dist.csv