Fix for Cofunction self-assignment via interpolation
#300
Workflow file for this run
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| name: Pip install Firedrake | |
| on: | |
| # Push to master or PR | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| concurrency: | |
| # Cancels jobs running if new commits are pushed | |
| group: > | |
| ${{ github.workflow }}- | |
| ${{ github.event.pull_request.number || github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| build: | |
| name: "Build Firedrake using pip" | |
| runs-on: ubuntu-latest | |
| container: | |
| image: firedrakeproject/firedrake-env:latest | |
| options: --user root | |
| defaults: | |
| run: | |
| shell: bash | |
| working-directory: /home/firedrake | |
| strategy: | |
| # Don't immediately kill real if complex fails and vice versa. | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - scalar-type: real | |
| petsc_arch: default | |
| - scalar-type: complex | |
| petsc_arch: complex | |
| env: | |
| # PETSC_DIR, HDF5_DIR and MPICH_DIR are set inside the docker image | |
| FIREDRAKE_CI_TESTS: 1 | |
| PYOP2_CI_TESTS: 1 | |
| PETSC_ARCH: ${{ matrix.petsc_arch }} | |
| OMP_NUM_THREADS: 1 | |
| OPENBLAS_NUM_THREADS: 1 | |
| RDMAV_FORK_SAFE: 1 | |
| steps: | |
| - name: Cleanup | |
| if: ${{ always() }} | |
| run: rm -rf pip_venv | |
| - name: Create a venv | |
| run: | | |
| python3 -m venv pip_venv | |
| ln -s /__w/firedrake/firedrake/src pip_venv/ | |
| - uses: actions/checkout@v4 | |
| with: | |
| path: src/firedrake | |
| - name: Install libsupermesh | |
| run: | | |
| source pip_venv/bin/activate | |
| python -m pip install 'rtree>=1.2' | |
| cd pip_venv/src | |
| git clone https://github.com/firedrakeproject/libsupermesh.git | |
| mkdir -p libsupermesh/build | |
| cd libsupermesh/build | |
| cmake .. \ | |
| -DBUILD_SHARED_LIBS=ON \ | |
| -DCMAKE_INSTALL_PREFIX="$VIRTUAL_ENV" \ | |
| -DMPI_C_COMPILER="$MPICH_DIR/mpicc" \ | |
| -DMPI_CXX_COMPILER="$MPICH_DIR/mpicxx" \ | |
| -DMPI_Fortran_COMPILER="$MPICH_DIR/mpif90" \ | |
| -DCMAKE_Fortran_COMPILER="$MPICH_DIR/mpif90" \ | |
| -DMPIEXEC_EXECUTABLE="$MPICH_DIR/mpiexec" | |
| make | |
| make install | |
| - name: Pip install | |
| run: | | |
| source pip_venv/bin/activate | |
| cd pip_venv/src | |
| export CC="$MPICH_DIR/mpicc" | |
| export CXX="$MPICH_DIR/mpicxx" | |
| export MPICC="$MPICH_DIR/mpicc" | |
| export MPI_HOME="$PETSC_DIR/packages" | |
| pip install \ | |
| --log=firedrake-install.log \ | |
| --no-binary mpi4py,h5py \ | |
| -v -e './firedrake[test]' | |
| - name: Add mpiexec to the venv and install timeout | |
| run: | | |
| source pip_venv/bin/activate | |
| cat << EOF > "$VIRTUAL_ENV/bin/mpiexec" | |
| #!/bin/bash | |
| "$MPICH_DIR"/mpiexec "\$@" | |
| EOF | |
| chmod +x "$VIRTUAL_ENV"/bin/mpiexec | |
| pip install -U pytest-timeout | |
| - name: Run Firedrake smoke tests | |
| run: | | |
| source pip_venv/bin/activate | |
| cd pip_venv/src/firedrake | |
| pytest -v tests/firedrake/test_0init.py | |
| pytest \ | |
| --durations=200 \ | |
| --timeout=1800 \ | |
| --timeout-method=thread \ | |
| -o faulthandler_timeout=1860 \ | |
| -n 12 --dist worksteal \ | |
| --junit-xml=firedrake.xml \ | |
| -sv tests/firedrake/regression -k "poisson_strong or stokes_mini or dg_advection" | |
| timeout-minutes: 120 | |
| - name: Publish Test Report | |
| uses: mikepenz/[email protected] | |
| if: ${{ always() && ( github.ref != 'refs/heads/master') }} | |
| with: | |
| report_paths: '/home/firedrake/pip_venv/src/firedrake/firedrake.xml' | |
| comment: true | |
| check_name: "Firedrake ${{ matrix.scalar-type }}" | |
| updateComment: true | |
| flaky_summary: true | |
| - name: Cleanup | |
| # Belt and braces: clean up before and after the run. | |
| if: ${{ always() }} | |
| run: rm -rf pip_venv |