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add tests for SAM files that corrupt with adam + htsjdk 2.20.x #120

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merged 1 commit into from
Sep 12, 2019

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@heuermh heuermh commented Sep 11, 2019

ADAM fails unit tests after bumping the htsjdk dependency version from 2.19.x to 2.20.x, see
bigdatagenomics/adam#2195

This pull request demonstrates that disq does not share this issue.

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heuermh commented Sep 11, 2019

Similar unit tests also fail in Hadoop-BAM + htsjdk 2.20.x, see HadoopGenomics/Hadoop-BAM#203

@tomwhite tomwhite merged commit 65cfd22 into disq-bio:master Sep 12, 2019
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Thanks @heuermh

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heuermh commented Sep 12, 2019

Thank you, @tomwhite

@heuermh heuermh deleted the corrupt-sam branch September 12, 2019 14:36
@heuermh heuermh added this to the 0.4.0 milestone Sep 30, 2019
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