mice8992-2016

Code used in MiCE 8992 Spring 2016

Course Code Browser

The Course Code Browser in HTML R Markdown output is here:
http://metagenome.cs.umn.edu/microbiomecodebrowser/doc/index.html

Getting rmarkdown working

• Install rmarkdown package in R

install.packages('rmarkdown',repo='http://cran.wustl.edu')

• google and install pandoc

• google and install basictex for mac (to get pdflatex)

• install "framed" and "titling" packages

sudo tlmgr update --self
sudo tlmgr install framed
sudo tlmgr install titling