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Update ImagingExtractor#365

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pauladkisson wants to merge 27 commits into0.6.0devcatalystneuro/roiextractors:0.6.0devfrom 0.6.0catalystneuro/roiextractors:0.6.0Copy head branch name to clipboard

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Commits

Commits on Sep 19, 2024

• updated imaging extractor to reflect 1-channel imaging extractors

  pauladkisson

  committed
  4043df4

• updated get_dtype to abstract to facilitate more efficient implementations

  pauladkisson

  committed
  b3fc00c

• removed channel from get_frames and get_video

  pauladkisson

  committed
  889f721

• removed write_imaging

  pauladkisson

  committed
  ae8f055

Commits on Sep 20, 2024

• cleaned up numpyimagingextractor init

  pauladkisson

  committed
  76aa346

• removed channels from numpyimagingextractor

  pauladkisson

  committed
  c9c3a54

• removed get_available_channels from imagingextractor

  pauladkisson

  committed
  bd954c4

• updated testing with no channels

  pauladkisson

  committed
  6431da8

• updated get_frames to allow frame_idxs out of order

  pauladkisson

  committed
  358923e

• moved check_imaging_equal to imagingextractor itself

  pauladkisson

  committed
  0dfab19

• added imagingextractor_mixin

  pauladkisson

  committed
  0d45f9f

• added test_numpy_imaging_extractor with mixin

  pauladkisson

  committed
  a4797ee

• fixed imaging extractor to pass tests

  pauladkisson

  committed
  1cd743d

Commits on Sep 21, 2024

• switched to fixtures to allow more complex setup

  pauladkisson

  committed
  8db166f

• added from file test

  pauladkisson

  committed
  1bdf12e

Commits on Sep 23, 2024

• fixed frame_slice so that it passes tests

  pauladkisson

  committed
  fc43167

• moved input handling to frame_slice method instead of init

  pauladkisson

  committed
  ca7bcc3

• updated frame validation

  pauladkisson

  committed
  36ed953

• updated frame validation

  pauladkisson

  committed
  2d1f3f2

Commits on Sep 24, 2024

• refactored frame slice tests into their own mixin

  pauladkisson

  committed
  cd26c34

• added tests for frame_slice method

  pauladkisson

  committed
  211f9c3

• Merge branch '0.6.0dev' into 0.6.0

  pauladkisson

  authored
  7ea7142

• reorganized tests to pass while PR is in progress

  pauladkisson

  committed
  2e8dc4f

• ignore old_tests

  pauladkisson

  committed
  777393e

• Merge branch '0.6.0dev' into 0.6.0

  pauladkisson

  committed
  667ebb8

• fixed python 3.9 isinstance bug

  pauladkisson

  committed
  ae8d6e6

• refactored input validation for get_video and get_frames into their own private methods

  pauladkisson

  committed
  30279d2