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Bio-AI Lab

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  1. Arctic-LLM-Workshop-2023 Arctic-LLM-Workshop-2023 Public

    Welcome to the official GitHub repository for the Arctic Large Language Model (LLM) Workshop hosted by the Bio-AI Lab on the 27th and 28th of October, 2023. This repository serves as a comprehensiv…

    Jupyter Notebook 2 2

  2. 3DOSL 3DOSL Public

    Official repository for Code accompanying the dataset

    Jupyter Notebook 1

  3. physeg physeg Public

    Code from the paper "Physics based machine learning for sub-cellular segmentation in living cells." In Nature, 2021.

    Python 1

  4. Inpainting-Archive Inpainting-Archive Public

    Hypergraphs Image Inpainting in Scanning Acoustic Microscopy for Super-Resolution

    Python

  5. IDL-Archive IDL-Archive Public

    This is a repository that contains practice module for the book 'Interpretability in Deep Learning'. This is recommended to AI practitioners and basically anyone who wants an overview of techniques…

    Jupyter Notebook

  6. VirtualStain_I2I-Archive VirtualStain_I2I-Archive Public

    Code for Virtual Labeling of Mitochondria in Living Cells using Correlative Imaging and Physics-guided Deep Learning

    Python

Repositories

Showing 10 of 15 repositories
  • StokesVertexBeam-Archive Public

    Implements a deep learning framework for classifying 15 types of hybridly polarized Stokes vortex beams using diffraction-based Stokes polarimetry. It supports three experimental designs: simulation-only training, experimental 10-fold cross-validation, and mixed data training, achieving robust recognition even under experimental noise.

    bioailab/StokesVertexBeam-Archive’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Dec 18, 2024
  • Mito_Analysis_JOVE Public

    Supplementary files to the article "Analyzing Mitochondrial Morphology Through Simulation Supervised Learning"

    bioailab/Mito_Analysis_JOVE’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Dec 9, 2024
  • NN-Illumination-Estimation-FPM-Archive Public

    A Faster R-CNN approach for illumination estimation in Fourier ptychography by casting it as an object detection problem. It enhances superresolution, aberration correction, and quantitative phase imaging by providing highly robust illumination estimation.

    bioailab/NN-Illumination-Estimation-FPM-Archive’s past year of commit activity
    Python 0 0 0 0 Updated Dec 5, 2024
  • Aux-Net-Archive Public

    Auxiliary Network to handle dimension varying inputs in an online setting

    bioailab/Aux-Net-Archive’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Dec 5, 2024
  • UltraMNIST_FasterRCNN-Archive Public

    For benchmarking convolutional neural networks on large images with multi-scale features. It includes experiments using Faster R-CNN to evaluate model performance under varying levels of noise and complexity, facilitating the development of new CNN methods for large scientific images.

    bioailab/UltraMNIST_FasterRCNN-Archive’s past year of commit activity
    Python 0 0 0 0 Updated Dec 5, 2024
  • HaphazardInputsReview-Archive Public

    Code and datasets for our comprehensive review of online learning models that handle dynamic, missing, or evolving input features. Includes implementations and tools for evaluation across multiple datasets.

    bioailab/HaphazardInputsReview-Archive’s past year of commit activity
    Python 0 0 0 0 Updated Dec 5, 2024
  • MABNet-Archive Public

    Master Assistant Buddy Network for Image Retrieval

    bioailab/MABNet-Archive’s past year of commit activity
    Python 0 0 0 0 Updated Dec 5, 2024
  • Aux-Drop-Archive Public

    A dropout regularization strategy for online learning with dynamic features, Aux-Drop ensures robust adaptability to missing, obsolete, or emerging inputs. Proven effective on multiple benchmarking datasets.

    bioailab/Aux-Drop-Archive’s past year of commit activity
    Python 0 0 0 0 Updated Dec 5, 2024
  • VirtualStain_I2I-Archive Public

    Code for Virtual Labeling of Mitochondria in Living Cells using Correlative Imaging and Physics-guided Deep Learning

    bioailab/VirtualStain_I2I-Archive’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Dec 5, 2024
  • IDL-Archive Public

    This is a repository that contains practice module for the book 'Interpretability in Deep Learning'. This is recommended to AI practitioners and basically anyone who wants an overview of techniques to make their deep learning models more interpretable.

    bioailab/IDL-Archive’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Dec 5, 2024

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