ngs-chew v0.9.4

Bug Fixes

• issue with truthiness of numpy array (#70) (698d2a0)

ngs-chew v0.9.3

Bug Fixes

• coercing chrX hom/het ratio from None to 0 (#62) (8aaf3ae)
• using previous chrX sites (#64) (#67) (62990a7)

ngs-chew v0.9.2

Bug Fixes

• release-please action (#60) (718bd1d)

ngs-chew v0.9.1

Bug Fixes

• remove versioneer (Python 3.12+) (#58) (0b3876e)

ngs-chew v0.9.0

Features

• add "serve" command (#24) (#35) (56f7078)
• tests with larger (excerpt) datasets (#55) (8ee5421)
• updating sites files for stable RSIDs (#42) (eaef39d)

Bug Fixes

• Fills the stats line (#57) (f74bb70)

Documentation

• adding badges to README (#52) (68c5c82)
• adding sphinx-based documentation (#51) (18ab48b)

ngs-chew v0.8.1

Bug Fixes

• sites for GRCh38 (#24) (#39) (79773ef)

ngs-chew v0.8.0

Features

• roh calling with "bcftools roh" (#25) (a4af62c)

ngs-chew v0.7.1

Bug Fixes

• fixing chrX sites BED files (#22) (c0fb33e)

ngs-chew v0.7.0

Features

• collect chrX SNP information for sex identification (#12) (#15) (b210312)
• gather samtools idxstats output (#13) (aafa3cf)
• interpret samtools idxstats output (#18) (50cd8fd)
• using coding regions for chrX sites (#20) (#21) (6c50688)
• write out ngs-chew version to header (#19) (c0f2de5)

Bug Fixes

• use actual peddy formulat for relatedness (#17) (cea0b6c)

ngs-chew v0.6.0

Features

• allow writing allele fraction to fingerprint file (#7) (76f1511)

Bug Fixes

• formula for relatedness was off by *2 (#9) (3550dfb)