build: test ci/cd workflow #1

	# This workflow will upload a Python Package using Twine when a release is created
	# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python#publishing-to-package-registries

	# This workflow uses actions that are not certified by GitHub.
	# They are provided by a third-party and are governed by
	# separate terms of service, privacy policy, and support
	# documentation.

	name: Upload Python Package

	on:
	push:
	branches:
	- main

	permissions:
	contents: read

	jobs:
	update:
	name: Update docs
	runs-on: ubuntu-latest
	permissions:
	contents: write

	steps:
	- uses: actions/checkout@v3
	with:
	fetch-depth: 0
	token: ${{ secrets.PAT }}
	ref: main
	- name: Install dependencies
	run: \|
	conda create --name proteinflow -y python=3.9
	conda run -n proteinflow python -m pip install torch --extra-index-url https://download.pytorch.org/whl/cpu
	conda run -n proteinflow python -m pip install numpy
	conda run -n proteinflow python -m pip install -e .
	- name: Install pdoc3 and black
	run: \|
	conda run -n proteinflow python -m pip install pdoc3 black
	- name: Reformat the code
	run: \|
	conda run -n proteinflow black .
	- name: Update the docs
	run: \|
	git pull origin main
	conda run -n proteinflow . dev/make_docs.sh
	echo ${{ needs.test.outputs.update }}
	- uses: stefanzweifel/git-auto-commit-action@v4
	with:
	commit_message: auto update
	skip_checkout: true

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