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@UW-Madison-Bacteriology-Bioinformatics

University of Wisconsin-Madison Dept of Bacteriology's Bioinformatics Research Support Service

A repository relevant to bioinformatics at UW-Madison.

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  1. chtc-containers chtc-containers Public

    This repos contains information how to build, test, and run containers on CHTC. It contains examples of definition files for several bioinformatics softwares.

  2. Computing Computing Public

    A guide to getting started with computing for microbiology analyses at UW-Madison

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Repositories

Showing 5 of 5 repositories
  • variant-annotation Public Forked from patriciatran/variant-annotation

    Annotate variants from long read data.

    UW-Madison-Bacteriology-Bioinformatics/variant-annotation’s past year of commit activity
    Shell 0 1 0 0 Updated Dec 23, 2024
  • genome-assembly-lr Public

    Pipeline to trim data, remove contaminants, assemble data (long reads).

    UW-Madison-Bacteriology-Bioinformatics/genome-assembly-lr’s past year of commit activity
    0 0 0 0 Updated Dec 11, 2024
  • binning_wf Public

    Metagenomic binning workflow implemented using DAGman/HTcondor

    UW-Madison-Bacteriology-Bioinformatics/binning_wf’s past year of commit activity
    Shell 1 0 1 0 Updated Dec 9, 2024
  • chtc-containers Public

    This repos contains information how to build, test, and run containers on CHTC. It contains examples of definition files for several bioinformatics softwares.

    UW-Madison-Bacteriology-Bioinformatics/chtc-containers’s past year of commit activity
    0 0 0 0 Updated Nov 25, 2024
  • Computing Public

    A guide to getting started with computing for microbiology analyses at UW-Madison

    UW-Madison-Bacteriology-Bioinformatics/Computing’s past year of commit activity
    1 0 0 0 Updated Nov 20, 2024

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