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- updated instructions
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GuillaumeLeGoc committed Dec 18, 2024
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## Install
Steps 1-3 below need to be performed only once. If Anaconda or conda is already installed, skip steps 1-2 and use the Anaconda prompt instead.
1. Install [miniconda3](https://docs.anaconda.com/free/miniconda/#id2), as user, add conda to PATH and make it the default interpreter.
1. Install [Miniforge](https://conda-forge.org/download/), as user, add conda to PATH and make it the default interpreter.
2. Open a terminal (PowerShell in Windows). run : `conda init` and restart the terminal.
3. Create a virtual environment named "hq" with Python 3.12 and PyTables:
3. Create a virtual environment named "hq" with Python 3.12:
```
conda create -n hq -c conda-forge python=3.12 pytables
conda create -n hq python=3.12
```
4. Activate the environment:
```
conda activate hq
```
5. Download the repository and unzip it on your computer, or clone with `git`.
5. Download the latest release from [here](https://github.com/TeamNCMC/histoquant/releases/latest) (choose "Source code (zip)) and unzip it on your computer.
6. Browse to the repository from the terminal and install the `histoquant` package:
```
cd /path/to/the/repo
cd /path/to/the/unzipped/folder
pip install .
```
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