fixed final issue with package version not working, openai version ne…

…eded to be 1.58.1 instead of 1.55.0

README.md

@@ -156,7 +156,7 @@ The default AI model used for all parts is `gpt-4o-mini`. If you want to use a d
 Here's how you would run the pipeline using the larger `gpt-4o` model:
 
 ```bash
-python pipeline.py --from-month=1 --to-month=12 --from-year=2019 --to-year=2024 --crossref-affiliation="Salisbury University" --as-excel --db-name=Your_Database_Name --pre-classification-model=gpt-4o --classification-model=gpt-4o --theme-model=gpt-4o
+python pipeline.py --from-month=1 --to-month=12 --from-year=2019 --to-year=2024 --crossref-affiliation="Salisbury University" --**as**-excel --db-name=Your_Database_Name --pre-classification-model=gpt-4o --classification-model=gpt-4o --theme-model=gpt-4o
 ```
 
 ### Option 2 - Your own script (Not recommended)

pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "academic_metrics"
-version = "1.0.0"
+version = "1.0.1"
 description = "A tool to extract and format academic data from Web of Science and Crossref"
 authors = [
     { name = "Spencer Presley", email = "[email protected]" },
@@ -25,7 +25,7 @@ dependencies = [
     "langchain_core==0.3.19",
     "langchain_google_genai==2.0.5",
     "langchain_openai==0.2.9",
-    "openai==1.55.0",
+    "openai==1.58.1",
     "pandas==2.2.3",
     "pydantic==2.9.2",
     "pylatexenc==2.10",

src/academic_metrics/DB/DatabaseSetup.py

@@ -78,6 +78,7 @@ def __init__(self, *, db_name: str, mongo_url: str):
         if not mongo_url:
             print("Url error")
             return
+
         self.mongo_url = mongo_url
         self.client = MongoClient(self.mongo_url, server_api=ServerApi("1"))
         self.db = self.client[db_name]