Merge branch 'dev' into 8094-modify-dice-loss

.github/workflows/cron.yml

@@ -75,7 +75,7 @@ jobs:
         if pgrep python; then pkill python; fi
       shell: bash
     - name: Upload coverage
-      uses: codecov/codecov-action@v4
+      uses: codecov/codecov-action@v5
       with:
         fail_ci_if_error: false
         files: ./coverage.xml
@@ -123,7 +123,7 @@ jobs:
         if pgrep python; then pkill python; fi
       shell: bash
     - name: Upload coverage
-      uses: codecov/codecov-action@v4
+      uses: codecov/codecov-action@v5
       with:
         fail_ci_if_error: false
         files: ./coverage.xml
@@ -228,7 +228,7 @@ jobs:
         if pgrep python; then pkill python; fi
       shell: bash
     - name: Upload coverage
-      uses: codecov/codecov-action@v4
+      uses: codecov/codecov-action@v5
       with:
         fail_ci_if_error: false
         files: ./coverage.xml

.github/workflows/pythonapp-gpu.yml

@@ -137,6 +137,6 @@ jobs:
       shell: bash
     - name: Upload coverage
       if: ${{ github.head_ref != 'dev' && github.event.pull_request.merged != true }}
-      uses: codecov/codecov-action@v4
+      uses: codecov/codecov-action@v5
       with:
         files: ./coverage.xml

.github/workflows/setupapp.yml

@@ -72,7 +72,7 @@ jobs:
         if pgrep python; then pkill python; fi
       shell: bash
     - name: Upload coverage
-      uses: codecov/codecov-action@v4
+      uses: codecov/codecov-action@v5
       with:
         fail_ci_if_error: false
         files: ./coverage.xml
@@ -119,7 +119,7 @@ jobs:
         BUILD_MONAI=1 ./runtests.sh --build --quick --min
         coverage xml --ignore-errors
     - name: Upload coverage
-      uses: codecov/codecov-action@v4
+      uses: codecov/codecov-action@v5
       with:
         fail_ci_if_error: false
         files: ./coverage.xml

monai/transforms/utility/array.py

@@ -1054,12 +1054,11 @@ def __call__(
 
 class ConvertToMultiChannelBasedOnBratsClasses(Transform):
     """
-    Convert labels to multi channels based on brats18 classes:
-    label 1 is the necrotic and non-enhancing tumor core
-    label 2 is the peritumoral edema
-    label 4 is the GD-enhancing tumor
-    The possible classes are TC (Tumor core), WT (Whole tumor)
-    and ET (Enhancing tumor).
+    Convert labels to multi channels based on `brats18 <https://www.med.upenn.edu/sbia/brats2018/data.html>`_ classes,
+    which include TC (Tumor core), WT (Whole tumor) and ET (Enhancing tumor):
+    label 1 is the necrotic and non-enhancing tumor core, which should be counted under TC and WT subregion,
+    label 2 is the peritumoral edema, which is counted only under WT subregion,
+    label 4 is the GD-enhancing tumor, which should be counted under ET, TC, WT subregions.
     """
 
     backend = [TransformBackends.TORCH, TransformBackends.NUMPY]