Update run_transparent_singularity.sh #112
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| name: push-to-neurodesk | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| jobs: | |
| test_singularity_aria2: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Test singularity and aria2 before pushing to neurocommand | |
| run: /bin/bash .github/workflows/test_singularity_aria2.sh | |
| test_singularity_curl: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Test singularity and curl before pushing to neurocommand | |
| run: /bin/bash .github/workflows/test_singularity_curl.sh | |
| test_singularity_cvmfs: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Test singularity and cvmfs before pushing to neurocommand | |
| run: /bin/bash .github/workflows/test_singularity_cvmfs.sh | |
| test_apptainer_curl: | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Test apptainer and curl before pushing to neurocommand | |
| run: /bin/bash .github/workflows/test_apptainer_curl.sh | |
| test_apptainer_cvmfs: | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Test apptainer and cvmfs before pushing to neurocommand | |
| run: /bin/bash .github/workflows/test_apptainer_cvmfs.sh | |
| test_apptainer_aria2: | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Test apptainer and curl before pushing to neurocommand | |
| run: /bin/bash .github/workflows/test_apptainer_aria2.sh | |
| push_to_neurocommand: | |
| needs: [test_singularity_aria2,test_singularity_curl,test_singularity_cvmfs,test_apptainer_aria2,test_apptainer_curl,test_apptainer_cvmfs] | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| repository: NeuroDesk/neurocommand | |
| token: ${{secrets.AUTOCOMMIT_FOR_NEUROCOMMAND}} | |
| persist-credentials: false | |
| fetch-depth: 0 | |
| - name: Setup git config | |
| run: | | |
| git config --local user.name "Github Action" | |
| git config --local user.email "[email protected]" | |
| git config pull.ff only | |
| - name: Setup git remotes | |
| run: | | |
| git remote add subtree https://stebo85:${{secrets.AUTOCOMMIT_FOR_NEUROCOMMAND}}@github.com/NeuroDesk/transparent-singularity.git | |
| git remote add upstream https://stebo85:${{secrets.AUTOCOMMIT_FOR_NEUROCOMMAND}}@github.com/NeuroDesk/neurocommand.git | |
| - name: Pull transparent-singularity into subtree | |
| run: git subtree pull --prefix neurodesk/transparent-singularity subtree master --squash | |
| - name: Push to neurodesk | |
| run: git push upstream main |