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Neermita18/README.md

Hello there! I'm Neermita.

I'm currently working on 🔭

  • Analysis of Multiomics Data of Breast Cancer to identify biomarkers and create a pipeline to predict tumor stages @ BITS Pilani
  • Spatial Gene Enhancement using the integration of single cell sequences with spatial image data @ IIT Jodhpur
  • Utilising tumor PET/CT scans to assess the tumor gene mutations using Multi-Task Learning with Transformers @ IIT Jodhpur

Pinned Loading

  1. ChemSync ChemSync Public

    Analysis of FDA-approved drugs using Lipinski's rule, Cosine Similarity and Tanimoto Coefficients; an end-to-end streamlit application

    Python

  2. BioScrape BioScrape Public

    A tkinter application displaying the biological data of a DNA sequence/gene from GenBank. Used Selenium and Beautiful Soup for web-scraping.

    Python

  3. NSCLC_gene_mutation_cse_intern NSCLC_gene_mutation_cse_intern Public

    Multi-task learning for NSCLC Radiogenomics. Assessing performance of Vision transformer-based models. Prediction of tumor gene mutation statuses as well as segmentation masks from PET/CT scans

    Jupyter Notebook 1

  4. Spatial_gene_enhancement_bio_intern Spatial_gene_enhancement_bio_intern Public

    Bioinformatics Intern at BSBE Department, IITJ. Benchmarking SOTA transcriptomics machine learning models using LOOCV and Spearman's Correlation Coefficient. Box-plots of methods displayed for visu…

    Jupyter Notebook

  5. Nutritionalreq_Software_Engineering_Project Nutritionalreq_Software_Engineering_Project Public

    HTML 2

  6. Kaggle_challenges Kaggle_challenges Public

    1) Pima_Indians_Diabetes_dataset: 83.11% accuracy. 2) Using ScanPy for gene expressions in scRNA sequencing. 3) Using traditional clustering on RNA dataset 4) Stroke Prediction 95% accuracy on test

    Jupyter Notebook