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Automated preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and RNA-seq workflows.

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seq2science

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Seq2science is the attempt of the van heeringen lab to generate a collection of generic pipelines/workflows which can be used by complete beginners to bioinformatics and experienced bioinformaticians alike. Please take a look at our docs for help with installation, how to run it, and best practices.

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Our supported workflows:

New users

Information for new users, such as how to install and configure can be found in our getting started page.

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Anything not working as expected? Please reach out to us via our issues page and we'll try to help you as soon as possible!

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Automated preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and RNA-seq workflows.

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  • Python 77.6%
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  • R 6.5%
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