Auto-calculate unit test coverage on PRs and view results on Codecov #3
Workflow file for this run
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
on: | |
push: | |
branches: [main, master, develop] | |
pull_request: | |
branches: [main, master, develop] | |
name: test-coverage.yaml | |
permissions: read-all | |
jobs: | |
test-coverage: | |
runs-on: ubuntu-latest | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- uses: r-lib/actions/setup-tinytex@v2 | |
- name: Preinstall required latex packages | |
run: > | |
tlmgr install | |
lastpage morefloats parskip pdflscape textpos multirow lipsum | |
fancyhdr colortbl soul setspace relsize makecell threeparttable | |
threeparttablex environ trimspaces | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
use-public-rspm: true | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
extra-packages: any::covr, any::xml2 | |
needs: coverage | |
- name: Test coverage | |
run: | | |
cov <- covr::package_coverage( | |
quiet = FALSE, | |
clean = FALSE, | |
install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package") | |
) | |
covr::to_cobertura(cov) | |
shell: Rscript {0} | |
- uses: codecov/codecov-action@v4 | |
with: | |
fail_ci_if_error: ${{ github.event_name != 'pull_request' && true || false }} | |
file: ./cobertura.xml | |
plugin: noop | |
disable_search: true | |
token: ${{ secrets.CODECOV_TOKEN }} | |
- name: Show testthat output | |
if: always() | |
run: | | |
## -------------------------------------------------------------------- | |
find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true | |
shell: bash | |
- name: Upload test results | |
if: failure() | |
uses: actions/upload-artifact@v4 | |
with: | |
name: coverage-test-failures | |
path: ${{ runner.temp }}/package |