feature_run_on_fsd #603
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Linting and tests | |
| on: | |
| push: | |
| branches: [ develop, main ] | |
| tags: [ '*' ] | |
| pull_request: | |
| branches: [ develop, main ] | |
| workflow_dispatch: {} | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| matrix: | |
| mpi_enabled: [0, 1] | |
| fail-fast: false | |
| steps: | |
| - name: checkout | |
| uses: actions/checkout@v2 | |
| - name: checkout h5flow | |
| run: | | |
| cd .. | |
| git clone https://github.com/peter-madigan/h5flow.git | |
| - name: setup conda (mpi) | |
| uses: conda-incubator/setup-miniconda@v2 | |
| if: matrix.mpi_enabled == 1 | |
| env: | |
| CC: mpicc | |
| HDF5_MPI: "ON" | |
| with: | |
| auto-update-conda: true | |
| activate-environment: test | |
| python-version: "3.11" | |
| environment-file: test/env.yaml | |
| - name: setup conda (no mpi) | |
| uses: conda-incubator/setup-miniconda@v2 | |
| if: matrix.mpi_enabled == 0 | |
| with: | |
| auto-update-conda: true | |
| activate-environment: test | |
| python-version: "3.11" | |
| environment-file: test/env-nompi.yaml | |
| - name: install h5flow (mpi) | |
| if: matrix.mpi_enabled == 1 | |
| env: | |
| CC: mpicc | |
| HDF5_MPI: "ON" | |
| run: | | |
| cd ../h5flow | |
| conda env update --file environment.yml | |
| pip install . | |
| - name: install h5flow (no mpi) | |
| if: matrix.mpi_enabled == 0 | |
| run: | | |
| cd ../h5flow | |
| conda env update --file environment-nompi.yml | |
| pip install . | |
| - name: install | |
| run: | | |
| pip install . | |
| - name: lint | |
| run: | | |
| conda install flake8 | |
| # stop the build if there are Python syntax errors or undefined names | |
| python -m flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
| python -m flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
| - name: test | |
| run: | | |
| pytest -vv --log-level=DEBUG |