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Prepare for python 3.10 #49

Prepare for python 3.10

Prepare for python 3.10 #49

# This workflow will install and then lint the code with Flake8 and Pylint.
# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python
name: Regression Tests
on:
push:
branches: ['master', 'devel']
pull_request:
branches: '*'
jobs:
pure-pip-installation:
# This stage only tests if the installation is possible.
# The evironment created herein will be discared and re-created in the test stage.
runs-on: ubuntu-latest
strategy:
matrix:
# Add multiple Python versions here to run tests on new(er) versions.
python-version: ["3.10"]
fail-fast: false
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v3
with:
python-version: ${{ matrix.python-version }}
- name: Build and install
run: |
python -m pip install --upgrade pip
# Install with -e (in editable mode) to allow the tracking of the test coverage
pip install -e .
# Check result of installation
python -c "import loadskernel"
which loads-kernel
which model-viewer
which loads-compare
conda-and-pip-installation:
# This stage only tests if the installation is possible.
# The evironment created herein will be discared and re-created in the test stage.
runs-on: ubuntu-latest
strategy:
matrix:
# Add multiple Python versions here to run tests on new(er) versions.
python-version: ["3.10", "3.11"]
fail-fast: false
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v3
with:
python-version: ${{ matrix.python-version }}
- name: Build and install
run: |
# Install same requirements as to be used during regression testing
source $CONDA/etc/profile.d/conda.sh
conda activate
conda install -y -c conda-forge --file ./tests/requirements.txt
# Install with -e (in editable mode) to allow the tracking of the test coverage
pip install -e .
# Check result of installation
python -c "import loadskernel"
which loads-kernel
which model-viewer
which loads-compare
Pytest:
runs-on: ubuntu-latest
strategy:
matrix:
# Add multiple Python versions here to run tests on new(er) versions.
python-version: ["3.10"]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v3
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
# Install the package itself to make sure that all imports work.
pip install -e .
- name: Analysing the code with pytest
run: |
# Run the actual testing of the code with pytest
# Using python -m pytest is necessary because pytest has the habit of not looking in the site-packages of the venv
python -m pytest -v --basetemp=./tmp -k test_dummy --cov=loadskernel --cov=modelviewer --cov=loadscompare --junitxml=testresult.xml
# Create some reports
coverage report
coverage xml -o coverage.xml
coverage html --directory ./coverage/coverage
- name: Upload test restults and coverage as an artifact
uses: actions/upload-artifact@v4
with:
name: test results and coverage
path: |
testresult.xml
coverage.xml
coverage
if-no-files-found: ignore
Jupyter:
runs-on: ubuntu-latest
strategy:
matrix:
# Select Python version to be used for compiling here.
python-version: ["3.10"]
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v3
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
# Install the package itself to make sure that all imports work.
pip install .
- name: Assemble the tutorials to a jupyter book and build htlm pages
run: |
jupyter-book build ./doc/tutorials
# Put the html into a 2nd-level sub-folder and use 1st-level subfolder for uploading
mkdir ./doc/html
mv ./doc/tutorials/_build/html ./doc/html/tutorials
- name: Upload Jupyter book as an artifact
uses: actions/upload-artifact@v4
with:
name: tutorials
path: ./doc/html
if-no-files-found: ignore
combine-pages:
runs-on: ubuntu-latest
# Add a dependency to the build job
needs: [Jupyter, Pytest]
steps:
- uses: actions/download-artifact@v4
with:
merge-multiple: true
- name: See what we've got
run: |
ls -la
#tar -xf artifact.tar
#ls -la
- name: Upload subdirectories for pages
# This is not a normal artifact but one that can be deployed to the GitHub pages in the next step
uses: actions/upload-pages-artifact@v3
with:
name: github-pages # This name may not be changed according to the documentation
path: |
./tutorials
./coverage
if-no-files-found: ignore
deploy-pages:
# Add a dependency to the build job
needs: combine-pages
# Grant GITHUB_TOKEN the permissions required to make a Pages deployment
permissions:
pages: write # to deploy to Pages
id-token: write # to verify the deployment originates from an appropriate source
# Deploy to the github-pages environment
environment:
name: github-pages
url: ${{ steps.deployment.outputs.page_url }}
runs-on: ubuntu-latest
steps:
- name: Setup GitHub Pages
uses: actions/configure-pages@v4
- name: Deploy to Pages
id: deployment
uses: actions/deploy-pages@v4