denovo-module-scaffolding

Bioinformatics Training Platform (BTP) Module: Contig Scaffolding

• Topic
  • Contig Scaffolding
• Target Audience
  • Biologists
  • Non-bioinformaticians
  • Little to no programming expereience
• Prerequisites
  • None
• Key Learning Outcomes
  • Run an assembly using long mate pair (LMP) reads.
  • Compare results of LMP assemblies with those from the short reads.
  • Run scaffolding and assess the assembly statistics`
• Time Required
  • 3.5 hrs

License

The contents of this repository are released under the Creative Commons Attribution 3.0 Unported License. For a summary of what this means, please see: http://creativecommons.org/licenses/by/3.0/deed.en_GB