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aind-smartspim-destripe

Source code to remove streaks from lightsheet images acquired with the SmartSPIM microscope. Currently, we are using a log spatial Fast Fourier Transform to remove the streaks. This works for us since our brains have cells with high intensity values that when we apply a dual-band filtering, artifacts are generated.

raw data

Dual-band

dual band filtering

Log Space FFT

log space filtering

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Image processing capsule to remove streaks from light-sheet images.

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