diff --git a/README.md b/README.md index 0ffc704d0..d53feaf50 100644 --- a/README.md +++ b/README.md @@ -28,7 +28,8 @@ Installation ```bash git clone --recursive https://github.com/walaj/SeqLib.git cd SeqLib -./configure +## cd htslib && ./configure --enable-libcurl && cd .. # support for remote (FTP/HTTPS/Google etc) BAM access +./configure ## or: ./configure LDFLAGS='-lcurl -lcrypto' # for remote support make ## for c++11 (req. for AhoCorasick), run as: make CXXFLAGS='-std=c++11' make install make seqtools ## for the command line version diff --git a/bwa b/bwa index fbd4dbc03..c02766e3c 160000 --- a/bwa +++ b/bwa @@ -1 +1 @@ -Subproject commit fbd4dbc03904eccd71cdca8cac7aa48da749c19c +Subproject commit c02766e3c34ac3f4af9842e20a54b7f9f4b36d0b diff --git a/htslib b/htslib index 0f298ce22..5163833ed 160000 --- a/htslib +++ b/htslib @@ -1 +1 @@ -Subproject commit 0f298ce22c5c825c506129bf242348a31630c382 +Subproject commit 5163833ede355f8c2a6788780c55d7598279e767