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Ubuntu WSL and Open-Suse server megahit_core read2sdbg #347

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feeka opened this issue Jan 3, 2023 · 0 comments
Open

Ubuntu WSL and Open-Suse server megahit_core read2sdbg #347

feeka opened this issue Jan 3, 2023 · 0 comments

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@feeka
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feeka commented Jan 3, 2023

I tried to execute megahit_core read2sdbg using WSL - Ubuntu, but unfortunately it returned the following error:

./megahit_core read2sdbg --read_lib_file ../../SRR19450608.fastq.gz --o out --host_mem 0.9
--------------------------------------------------

INFO  sorting/base_engine.cpp       :  148 - Preparing data...
terminate called after throwing an instance of 'std::bad_alloc'
  what():  std::bad_alloc

P.s.: I also utilized the tool by installing or compiling but still get the same error... I am not sure what is happening.

P.p.s.: I also utilized the compiled version of the tool(using instructions provided on the Github Readme) on Open-Suse server with 750Gb memory RAM but unfortunately the same error occurred. Maybe I am not using the right arguments.

Thanks ahead,
Best regards,
Fikrat

@feeka feeka changed the title WSL - Ubuntu megahit_core read2sdbg Ubuntu WSL and Open-Suse server megahit_core read2sdbg Jan 4, 2023
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